RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 GOLT1AQ6ZVE7 132 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 TRPT1Q86TN4 253 aaKnown RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 STHQ8IWL8 128 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 OR8A1Q8NGG7 326 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 RPUSD4Q96CM3 377 aaKnown RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 FMC1Q96HJ9 113 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 CNFNQ9BYD5 112 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 EIF5A2Q9GZV4 153 aaKnown RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 SAV1Q9H4B6 383 aaPredicted RBP3.25□□□□□ -1.89
ERCC1-216ENST00000592444 TREM1Q9NP99 234 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 TMEM242Q9NWH2 141 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 NAT8Q9UHE5 227 aa3.25□□□□□ -1.89
ERCC1-216ENST00000592444 IGKV3D-20A0A0C4DH25 116 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 A0A1B0GXF2 115 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 TMEM189A5PLL7 270 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 FBLL1A6NHQ2 334 aaKnown RBP3.24□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF727A8MUV8 499 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 F8W036 122 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 H3BMM0 161 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF324O75467 553 aaPredicted RBP3.24□□□□□ -1.89
ERCC1-216ENST00000592444 CXCL1P09341 107 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF688P0C7X2 276 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 CTRLP40313 264 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 AKR1C3P42330 323 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 CNN1P51911 297 aaKnown RBP3.24□□□□□ -1.89
ERCC1-216ENST00000592444 DAD1P61803 113 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 OR5I1Q13606 314 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 ESRGQ1W209 222 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 TDRG1Q3Y452 100 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 FOXI2Q6ZQN5 318 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 S100A7AQ86SG5 101 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 CBLN2Q8IUK8 224 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 SVBPQ8N300 66 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 Q8N814 137 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 GATD1Q8NB37 220 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 GTSF1Q8WW33 167 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 OSTCQ9NRP0 149 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 PSG8Q9UQ74 426 aa3.24□□□□□ -1.89
ERCC1-216ENST00000592444 IGKV3-7A0A075B6H7 116 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 TRBV24-1A0A075B6N3 115 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 A0A0J9YXV3 536 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 TEX48A0A1B0GUV7 120 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 SMIM27A0A1W2PRY6 76 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 COLCA2A8K830 154 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 B4DEV8 164 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 F5H768 121 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 APOC3P02656 99 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 TYMSP04818 313 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 S100A9P06702 114 aaKnown RBP3.23□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF705DP0CH99 300 aaPredicted RBP3.23□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF705BP0CI00 300 aaPredicted RBP3.23□□□□□ -1.89
ERCC1-216ENST00000592444 S100A7P31151 101 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 ZNF138P52744 262 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 FOXA3P55318 350 aaPredicted RBP3.23□□□□□ -1.89
ERCC1-216ENST00000592444 ERCC8Q13216 396 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 ELOBQ15370 118 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 TMEM241Q24JQ0 296 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 LINC01620Q4KN68 170 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 GFI1BQ5VTD9 330 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 IQCF2Q8IXL9 164 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 NHLRC2Q8NBF2 726 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 SFRP2Q96HF1 295 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 SGK494Q96LW2 274 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 LINC00467Q9BRT7 94 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 TP53TG3Q9ULZ0 132 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 ZFP30Q9Y2G7 519 aa3.23□□□□□ -1.89
ERCC1-216ENST00000592444 MRPS16Q9Y3D3 137 aaKnown RBP3.23□□□□□ -1.89
ERCC1-216ENST00000592444 SNAI2O43623 268 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 SH2D1AO60880 128 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 SNAPINO95295 136 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 RNASE3P12724 160 aaKnown RBP3.22□□□□□ -1.89
ERCC1-216ENST00000592444 GNG4P50150 75 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 DEFB131AP59861 70 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 RPL19P84098 196 aaKnown RBP3.22□□□□□ -1.89
ERCC1-216ENST00000592444 C21orf62-AS1Q17RA5 79 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 PSMG4Q5JS54 123 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 BAGE2Q86Y30 109 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 NARS2Q96I59 477 aaKnown RBP3.22□□□□□ -1.89
ERCC1-216ENST00000592444 IMMP2LQ96T52 175 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 RNASE7Q9H1E1 156 aaKnown RBP3.22□□□□□ -1.89
ERCC1-216ENST00000592444 AAMDCQ9H7C9 122 aa3.22□□□□□ -1.89
ERCC1-216ENST00000592444 TRAV9-1A0A075B6T8 112 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 FAM231BA6NCW3 169 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 KNCNA6PVL3 124 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 SIVA1O15304 175 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 BTN1A1Q13410 526 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 ADIRFQ15847 76 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 ZNF705AQ6ZN79 300 aaPredicted RBP3.21□□□□□ -1.9
ERCC1-216ENST00000592444 PRNTQ86SH4 94 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 C1orf158Q8N1D5 194 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 ZNF738Q8NE65 137 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 OR4B1Q8NGF8 309 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 LINC00477Q96M19 166 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
ERCC1-216ENST00000592444 CTDSP1Q9GZU7 261 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms