RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 ARMS2P0C7Q2 107 aa11.98□□□□□ -0.49
RPL28-210ENST00000560583 RPL35P42766 123 aaKnown RBP11.98□□□□□ -0.49
RPL28-210ENST00000560583 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
RPL28-210ENST00000560583 IBA57-AS1B1ANH7 110 aa11.97□□□□□ -0.49
RPL28-210ENST00000560583 MGST1P10620 155 aaKnown RBP11.97□□□□□ -0.49
RPL28-210ENST00000560583 Q5VSD8 79 aa11.97□□□□□ -0.49
RPL28-210ENST00000560583 PDE6DO43924 150 aa11.96□□□□□ -0.49
RPL28-210ENST00000560583 GCSHP23434 173 aa11.96□□□□□ -0.49
RPL28-210ENST00000560583 MEF2BQ02080 365 aaPredicted RBP11.96□□□□□ -0.49
RPL28-210ENST00000560583 PARLQ9H300 379 aa11.96□□□□□ -0.49
RPL28-210ENST00000560583 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 M0R381 172 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 BCL2P10415 239 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 HAMPP81172 84 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 OR10J3Q5JRS4 329 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 PIK3CD-AS1Q5SR53 167 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 DNLZQ5SXM8 178 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 LELP1Q5T871 98 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 ALKAL2Q6UX46 152 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 Q6ZSN1 163 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 ZFP82Q8N141 532 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 Q8N3U1 123 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 C11orf52Q96A22 123 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 Q9HAA7 133 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
RPL28-210ENST00000560583 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 TAGLN2P37802 199 aaKnown RBP11.94□□□□□ -0.5
RPL28-210ENST00000560583 GNG4P50150 75 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 CENPWQ5EE01 88 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
RPL28-210ENST00000560583 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
RPL28-210ENST00000560583 RHODO00212 210 aa11.93□□□□□ -0.5
RPL28-210ENST00000560583 BLOC1S1P78537 153 aa11.93□□□□□ -0.5
RPL28-210ENST00000560583 RPL19P84098 196 aaKnown RBP11.93□□□□□ -0.5
RPL28-210ENST00000560583 DMRTA1Q5VZB9 504 aa11.93□□□□□ -0.5
RPL28-210ENST00000560583 ZFP2Q6ZN57 461 aa11.93□□□□□ -0.5
RPL28-210ENST00000560583 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
RPL28-210ENST00000560583 DMBT1Q9UGM3 2413 aaPredicted RBP11.93□□□□□ -0.5
RPL28-210ENST00000560583 IGLV5-52A0A0A0MRZ9 124 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 A0A1B0GVG6 124 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 PSCAO43653 123 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
RPL28-210ENST00000560583 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 Q8N814 137 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 JPT2Q9H910 190 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 Q9UF83 564 aa11.92□□□□□ -0.5
RPL28-210ENST00000560583 SMR3BP02814 79 aaPredicted RBP11.91□□□□□ -0.5
RPL28-210ENST00000560583 WFDC2Q14508 124 aa11.91□□□□□ -0.5
RPL28-210ENST00000560583 NTN5Q8WTR8 489 aaPredicted RBP11.91□□□□□ -0.5
RPL28-210ENST00000560583 FRZBQ92765 325 aa11.91□□□□□ -0.5
RPL28-210ENST00000560583 A0A087WWL8 130 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 RAB19A4D1S5 217 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 CXCL1P09341 107 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 LAGE3Q14657 143 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 SAMD10Q9BYL1 202 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 BIN3Q9NQY0 253 aa11.9□□□□□ -0.5
RPL28-210ENST00000560583 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.51
RPL28-210ENST00000560583 FLG2Q5D862 2391 aaPredicted RBP11.89□□□□□ -0.51
RPL28-210ENST00000560583 GAGE12JA6NER3 117 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 GAGE1Q13065 139 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 GAGE4Q13068 117 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 GAGE5Q13069 117 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 GAGE13Q4V321 117 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 SFRP2Q96HF1 295 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 BOLA1Q9Y3E2 137 aa11.89□□□□□ -0.51
RPL28-210ENST00000560583 SSTP61278 116 aa11.88□□□□□ -0.51
RPL28-210ENST00000560583 C14orf178Q8N769 122 aaPredicted RBP11.88□□□□□ -0.51
RPL28-210ENST00000560583 TPPP3Q9BW30 176 aa11.88□□□□□ -0.51
RPL28-210ENST00000560583 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
RPL28-210ENST00000560583 P01737 135 aa11.87□□□□□ -0.51
RPL28-210ENST00000560583 RPS20P60866 119 aaKnown RBP11.87□□□□□ -0.51
RPL28-210ENST00000560583 ZNF56Q15929 161 aa11.87□□□□□ -0.51
RPL28-210ENST00000560583 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
RPL28-210ENST00000560583 OR10AG1Q8NH19 301 aa11.87□□□□□ -0.51
RPL28-210ENST00000560583 FAM30AQ9NZY2 134 aa11.87□□□□□ -0.51
RPL28-210ENST00000560583 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
RPL28-210ENST00000560583 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
RPL28-210ENST00000560583 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
RPL28-210ENST00000560583 CEBPGP53567 150 aa11.85□□□□□ -0.51
RPL28-210ENST00000560583 DAZ4Q86SG3 579 aaKnown RBP11.85□□□□□ -0.51
RPL28-210ENST00000560583 DAZ3Q9NR90 486 aaKnown RBP11.85□□□□□ -0.51
RPL28-210ENST00000560583 RBFOX3A6NFN3 312 aa11.84□□□□□ -0.51
RPL28-210ENST00000560583 SNAI2O43623 268 aa11.84□□□□□ -0.51
RPL28-210ENST00000560583 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
RPL28-210ENST00000560583 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
RPL28-210ENST00000560583 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
RPL28-210ENST00000560583 F5H697 171 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms