RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 VOPP1Q96AW1 172 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 DEFB121Q5J5C9 76 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 GTSF1Q8WW33 167 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 PAPPA2Q9BXP8 1791 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 LINC00526Q96FQ7 95 aa7.14□□□□□ -1.27
SCN8A-203ENST00000545061 IGHV7-4-1A0A0J9YVY3 117 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 WIPF3A6NGB9 483 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 K7EQD1 137 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 RNF144BQ7Z419 303 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
SCN8A-203ENST00000545061 SIRPDQ9H106 197 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 IGHV3-38A0A0C4DH36 116 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 WISP3O95389 354 aaPredicted RBP7.13□□□□□ -1.27
SCN8A-203ENST00000545061 CISD3P0C7P0 127 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 CD24P25063 80 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 DEFB131AP59861 70 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 PRR20EP86478 221 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 PRR20CP86479 221 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 PRR20DP86480 221 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 PRR20BP86481 221 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 PRR20AP86496 221 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.13□□□□□ -1.27
SCN8A-203ENST00000545061 XCL2Q9UBD3 114 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 H3BRN7 92 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 TFF1P04155 84 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 ACANP16112 2415 aa7.13□□□□□ -1.27
SCN8A-203ENST00000545061 COL5A1P20908 1838 aaPredicted RBP7.12□□□□□ -1.27
SCN8A-203ENST00000545061 TTC28Q96AY4 2481 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 RNASE6Q93091 150 aaKnown RBP7.12□□□□□ -1.27
SCN8A-203ENST00000545061 CCDC168Q8NDH2 2452 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.12□□□□□ -1.27
SCN8A-203ENST00000545061 COL24A1Q17RW2 1714 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 PAQR4Q8N4S7 273 aaPredicted RBP7.12□□□□□ -1.27
SCN8A-203ENST00000545061 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 MST1LQ2TV78 715 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 CFHR3Q02985 330 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 FOXF2Q12947 444 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 VPREB3Q9UKI3 123 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.12□□□□□ -1.27
SCN8A-203ENST00000545061 IGKV2-29A2NJV5 120 aaPredicted RBP7.12□□□□□ -1.27
SCN8A-203ENST00000545061 PRR31Q5SQ13 230 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
SCN8A-203ENST00000545061 RBX1P62877 108 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 EBI3Q14213 229 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 TMEM223A0PJW6 202 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 C2CD3Q4AC94 2353 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 GATA4P43694 442 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 C16orf74Q96GX8 76 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 PSPHP1O15172 72 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 ODF1Q14990 250 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 LINC00114Q6XXX2 140 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 IGKV1OR2-108A0A075B7D4 117 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
SCN8A-203ENST00000545061 UBE2D3P61077 147 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 C20orf204Q6ZNR8 217 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 C5orf38Q86SI9 138 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 IGKV1-8A0A0C4DH67 115 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 ADAMTS20P59510 1910 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 GLI3P10071 1580 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 NCR3O14931 201 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 SPATA12Q7Z6I5 190 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 LINC01465Q8N7H1 131 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 CCKP06307 115 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 IGHV1-2P23083 117 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 MIR7-3HGQ8N6C7 128 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 LOC107984640A0A0U1RRK4 108 aa7.1□□□□□ -1.27
SCN8A-203ENST00000545061 IGKV1-9A0A0C4DH69 117 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 B4DSR2 109 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 FAM110DQ8TAY7 271 aaPredicted RBP7.09□□□□□ -1.27
SCN8A-203ENST00000545061 MDFICQ9P1T7 246 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.09□□□□□ -1.27
SCN8A-203ENST00000545061 Q6ZVQ6 151 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 LOXP28300 417 aaPredicted RBP7.09□□□□□ -1.27
SCN8A-203ENST00000545061 IL9P15248 144 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 Q6JHZ5 121 aa7.09□□□□□ -1.27
SCN8A-203ENST00000545061 PRR19A6NJB7 356 aa7.09□□□□□ -1.28
SCN8A-203ENST00000545061 BRWD3Q6RI45 1802 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 LINC00473A8K010 186 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 SP7Q8TDD2 431 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-203ENST00000545061 Q9HAA7 133 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 IGLV3-21P80748 117 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-203ENST00000545061 OVOL3O00110 214 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 CCL18P55774 89 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 TDRG1Q3Y452 100 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 ZNF462Q96JM2 2506 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 UFSP1Q6NVU6 142 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 FAM120AOSQ5T036 256 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
SCN8A-203ENST00000545061 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
SCN8A-203ENST00000545061 H3BUX3 64 aa7.07□□□□□ -1.28
SCN8A-203ENST00000545061 CD177Q8N6Q3 437 aa7.07□□□□□ -1.28
SCN8A-203ENST00000545061 IGLV3-9A0A075B6K5 115 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms