RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 IFNA1P01562 189 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 ARMS2P0C7Q2 107 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 WDR73Q6P4I2 378 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 TCTE3Q8IZS6 198 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 TRAV34A0A0B4J273 112 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 EIF3GO75821 320 aaKnown RBP eCLIP7□□□□□ -1.29
CSDE1-217ENST00000534699 CRIP1P50238 77 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 ZNF471Q9BX82 626 aaPredicted RBP7□□□□□ -1.29
CSDE1-217ENST00000534699 FAT2Q9NYQ8 4349 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 PAGE4O60829 102 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 RPL36AP83881 106 aaKnown RBP7□□□□□ -1.29
CSDE1-217ENST00000534699 TMUB2Q71RG4 321 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 FAM213BQ8TBF2 198 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 SFT2D1Q8WV19 159 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 RPL36ALQ969Q0 106 aaKnown RBP7□□□□□ -1.29
CSDE1-217ENST00000534699 SGK494Q96LW2 274 aa7□□□□□ -1.29
CSDE1-217ENST00000534699 DNAJC30Q96LL9 226 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 XKRY2A2RUG3 117 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 PDE6DO43924 150 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 CACNG7P62955 275 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 Q0VG73 95 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 KCNIP4Q6PIL6 250 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 BAGE2Q86Y30 109 aa6.99□□□□□ -1.29
CSDE1-217ENST00000534699 LOC100131303A0A0U1RQF7 123 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 H3BVH4 76 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 PSCAO43653 123 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 SULT1A2P50226 295 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 PRR27Q6MZM9 219 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 MAPKAPK5-AS1Q8N8E1 139 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 GCSHP23434 173 aa6.98□□□□□ -1.29
CSDE1-217ENST00000534699 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 ATRAIDQ6UW56 229 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 SLC51BQ86UW2 128 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 F2Z2F3 143 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 NKX2-5P52952 324 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-217ENST00000534699 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 FRZBQ92765 325 aa6.97□□□□□ -1.29
CSDE1-217ENST00000534699 H7C1H1 209 aa6.96□□□□□ -1.29
CSDE1-217ENST00000534699 UBE2D3P61077 147 aa6.96□□□□□ -1.29
CSDE1-217ENST00000534699 UBE2D2P62837 147 aa6.96□□□□□ -1.29
CSDE1-217ENST00000534699 CCL20P78556 96 aa6.96□□□□□ -1.29
CSDE1-217ENST00000534699 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.29
CSDE1-217ENST00000534699 URGCP-MRPS24S4R325 110 aa6.96□□□□□ -1.29
CSDE1-217ENST00000534699 DAZ4Q86SG3 579 aaKnown RBP6.96□□□□□ -1.3
CSDE1-217ENST00000534699 Q8N814 137 aa6.96□□□□□ -1.3
CSDE1-217ENST00000534699 DAZ3Q9NR90 486 aaKnown RBP6.96□□□□□ -1.3
CSDE1-217ENST00000534699 VAX2Q9UIW0 290 aa6.96□□□□□ -1.3
CSDE1-217ENST00000534699 PKD1P98161 4303 aa6.96□□□□□ -1.3
CSDE1-217ENST00000534699 GAGE12JA6NER3 117 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 GAGE1Q13065 139 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 GAGE4Q13068 117 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 GAGE5Q13069 117 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 GAGE13Q4V321 117 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 Q8N976 141 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 NIT1Q86X76 327 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 AP1S3Q96PC3 154 aa6.95□□□□□ -1.3
CSDE1-217ENST00000534699 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
CSDE1-217ENST00000534699 DAZAP1Q96EP5 407 aaKnown RBP6.94□□□□□ -1.3
CSDE1-217ENST00000534699 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
CSDE1-217ENST00000534699 Q6ZSN1 163 aa6.94□□□□□ -1.3
CSDE1-217ENST00000534699 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-217ENST00000534699 IGLV5-52A0A0A0MRZ9 124 aa6.94□□□□□ -1.3
CSDE1-217ENST00000534699 TRGC1P0CF51 173 aa6.94□□□□□ -1.3
CSDE1-217ENST00000534699 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 GRIFINA4D1Z8 144 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 C19orf71A6NCJ1 209 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 EPM2AB3EWF7 344 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 M0R036 132 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 IGLC6P0CF74 106 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 RPL35P42766 123 aaKnown RBP6.93□□□□□ -1.3
CSDE1-217ENST00000534699 MEF2BQ02080 365 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-217ENST00000534699 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 M0R381 172 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
CSDE1-217ENST00000534699 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 SMLR1H3BR10 107 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 IGHV3-30P01768 117 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 IGHV3-33P01772 117 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 IGHV3-30-3P0DP02 117 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 IGHV3-30-5P0DP03 117 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 GNG4P50150 75 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 GNG13Q9P2W3 67 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
CSDE1-217ENST00000534699 A0A087WX48 190 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 GZMBP10144 247 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 BCL2P10415 239 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 FER1L6-AS1Q8NA97 138 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 PGLYRP4Q96LB8 373 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 XGP55808 180 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 MIAQ16674 131 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 NEXN-AS1Q8NBZ9 246 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms