RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 FER1L5A0AVI2 2057 aa9.65□□□□□ -0.86
FGFR1-227ENST00000526570 MSMBP08118 114 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 Q8TCH9 128 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 EP400Q96L91 3159 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 TRBV7-1A0A0A6YYK4 115 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 SAA4P35542 130 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 KIAA2026Q5HYC2 2103 aa9.64□□□□□ -0.87
FGFR1-227ENST00000526570 A0A1W2PNU3 283 aaPredicted RBP9.63□□□□□ -0.87
FGFR1-227ENST00000526570 Q9HAA7 133 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 NDUFA4L2Q9NRX3 87 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 SIGLEC9Q9Y336 463 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 P0DMU3 169 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 FAM231AP0DMU4 169 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 FAM231CP0DMU5 169 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
FGFR1-227ENST00000526570 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 DKK1O94907 266 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 PCNX1Q96RV3 2341 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 WI2-2373I1.2A0A1W2PRP0 233 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
FGFR1-227ENST00000526570 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
FGFR1-227ENST00000526570 COX7A2LO14548 114 aa9.62□□□□□ -0.87
FGFR1-227ENST00000526570 Q8N976 141 aa9.62□□□□□ -0.87
FGFR1-227ENST00000526570 USF3Q68DE3 2245 aa9.62□□□□□ -0.87
FGFR1-227ENST00000526570 PHF3Q92576 2039 aaKnown RBP9.62□□□□□ -0.87
FGFR1-227ENST00000526570 YLPM1P49750 1951 aaKnown RBP9.62□□□□□ -0.87
FGFR1-227ENST00000526570 IGFL2Q6UWQ7 119 aa9.62□□□□□ -0.87
FGFR1-227ENST00000526570 ZNRD1Q9P1U0 126 aa9.62□□□□□ -0.87
FGFR1-227ENST00000526570 COL4A3Q01955 1670 aa9.62□□□□□ -0.87
FGFR1-227ENST00000526570 A0A0J9YXV3 536 aa9.61□□□□□ -0.87
FGFR1-227ENST00000526570 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
FGFR1-227ENST00000526570 IGLV1-44P01699 117 aa9.61□□□□□ -0.87
FGFR1-227ENST00000526570 ODF3L1Q8IXM7 274 aa9.61□□□□□ -0.87
FGFR1-227ENST00000526570 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
FGFR1-227ENST00000526570 COL4A4P53420 1690 aaPredicted RBP9.61□□□□□ -0.87
FGFR1-227ENST00000526570 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 PLA2G5P39877 138 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 THAP8Q8NA92 274 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 DOCK7Q96N67 2140 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 MDFICQ9P1T7 246 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 GATA4P43694 442 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 WDR86Q86TI4 376 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 DAND5Q8N907 189 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 KLK5Q9Y337 293 aaPredicted RBP9.6□□□□□ -0.87
FGFR1-227ENST00000526570 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 IGLV3-1P01715 115 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 PLXND1Q9Y4D7 1925 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 ZNF407Q9C0G0 2248 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 H3BRN7 92 aa9.6□□□□□ -0.87
FGFR1-227ENST00000526570 SPRY4Q9C004 299 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 DENND4CQ5VZ89 1909 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.878e-7■■■□□ 16.2
FGFR1-227ENST00000526570 K7ERS5 55 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 KMT2EQ8IZD2 1858 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 NDUFB1O75438 58 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 GATA3P23771 443 aa9.59□□□□□ -0.87
FGFR1-227ENST00000526570 DOCK10Q96BY6 2186 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 BPY2O14599 106 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 ZFHX2Q9C0A1 2572 aaPredicted RBP9.58□□□□□ -0.88
FGFR1-227ENST00000526570 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
FGFR1-227ENST00000526570 LINC00310P59036 64 aa9.57□□□□□ -0.88
FGFR1-227ENST00000526570 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
FGFR1-227ENST00000526570 PIK3CD-AS1Q5SR53 167 aa9.57□□□□□ -0.88
FGFR1-227ENST00000526570 TECTAO75443 2155 aa9.57□□□□□ -0.88
FGFR1-227ENST00000526570 FAM19A3Q7Z5A8 133 aa9.57□□□□□ -0.88
FGFR1-227ENST00000526570 C17orf77Q96MU5 243 aa9.57□□□□□ -0.88
FGFR1-227ENST00000526570 MED13LQ71F56 2210 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 TTC28Q96AY4 2481 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 RSPO1Q2MKA7 263 aaPredicted RBP9.56□□□□□ -0.88
FGFR1-227ENST00000526570 MIFP14174 115 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 MIAQ16674 131 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 IGLV3-9A0A075B6K5 115 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 IGLV2-8P01709 118 aa9.56□□□□□ -0.88
FGFR1-227ENST00000526570 WT1-ASQ06250 92 aa9.55□□□□□ -0.88
FGFR1-227ENST00000526570 MSRB1Q9NZV6 116 aa9.55□□□□□ -0.88
FGFR1-227ENST00000526570 TRIAP1O43715 76 aa9.55□□□□□ -0.88
FGFR1-227ENST00000526570 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
FGFR1-227ENST00000526570 PLXNB3Q9ULL4 1909 aa9.55□□□□□ -0.88
FGFR1-227ENST00000526570 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
FGFR1-227ENST00000526570 MRPL36Q9P0J6 103 aaKnown RBP9.55□□□□□ -0.88
FGFR1-227ENST00000526570 Q6ZQT7 251 aa9.55□□□□□ -0.88
FGFR1-227ENST00000526570 ADAMTS9Q9P2N4 1935 aa9.55□□□□□ -0.88
FGFR1-227ENST00000526570 IGHV3-16A0A0C4DH30 117 aa9.54□□□□□ -0.88
FGFR1-227ENST00000526570 Q6JHZ5 121 aa9.54□□□□□ -0.88
FGFR1-227ENST00000526570 BDP1A6H8Y1 2624 aa9.54□□□□□ -0.88
FGFR1-227ENST00000526570 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
FGFR1-227ENST00000526570 C17orf58Q2M2W7 97 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms