RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TTTY10Q9BZA0 68 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 SLC5A7Q9GZV3 580 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 PLGRKTQ9HBL7 147 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 LYRM2Q9NU23 88 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 FKBP14Q9NWM8 211 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 MRPL36Q9P0J6 103 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 ZNF492Q9P255 531 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 RABL2AQ9UBK7 228 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 NAGKQ9UJ70 344 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 RABL2BQ9UNT1 228 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 LSM2Q9Y333 95 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 IGLV4-60A0A075B6I1 120 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TRBV19A0A075B6N1 114 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TRAV12-2A0A075B6T6 113 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 IGKV1OR2-108A0A075B7D4 117 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 IGKV1D-8A0A087WSZ0 117 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TRBV6-8A0A0A6YYG3 113 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TRAV21A0A0B4J279 112 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 PNMA8CA0A1B0GUJ8 204 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 LOC100130705A0A1B0GUX0 176 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 CRYM-AS1A6NIL9 109 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 COX7A2P2O60397 106 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 HYPMO75409 117 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 WBP4O75554 376 aaKnown RBP0.8□□□□□ -2.28
CD44-212ENST00000524922 MED6O75586 246 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 IGKV1-5P01602 117 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 CXCL1P09341 107 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 ESDP10768 282 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 AKR1C4P17516 323 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 G6PCP35575 357 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 FUSP35637 526 aaKnown RBP eCLIP0.8□□□□□ -2.28
CD44-212ENST00000524922 ETV1P50549 477 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 AKR1C2P52895 323 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 PIGPP57054 158 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TAS2R30P59541 319 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 RHOBP62745 196 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 BTN1A1Q13410 526 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 IL18Q14116 193 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 INSL4Q14641 139 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 CDNFQ49AH0 187 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 OR2B11Q5JQS5 317 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TMEM78Q5T7P6 136 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 CFAP126Q5VTH2 177 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 ENHOQ6UWT2 76 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TMEM17Q86X19 198 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 NHLRC2Q8NBF2 726 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 INO80EQ8NBZ0 244 aaPredicted RBP0.8□□□□□ -2.28
CD44-212ENST00000524922 SUN5Q8TC36 379 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 DTD1Q8TEA8 209 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 RAB2BQ8WUD1 216 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 MITD1Q8WV92 249 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 MRGPRFQ96AM1 343 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TVP23CQ96ET8 276 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 PGLYRP4Q96LB8 373 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 RETNLBQ9BQ08 111 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 C9orf16Q9BUW7 83 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 MRPS26Q9BYN8 205 aaKnown RBP0.8□□□□□ -2.28
CD44-212ENST00000524922 VCXQ9H320 206 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 GEMIN7Q9H840 131 aaKnown RBP0.8□□□□□ -2.28
CD44-212ENST00000524922 NDUFB11Q9NX14 153 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 EHFQ9NZC4 300 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 SHPKQ9UHJ6 478 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 NDUFA12Q9UI09 145 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 HIGD1AQ9Y241 93 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 AP4S1Q9Y587 144 aa0.8□□□□□ -2.28
CD44-212ENST00000524922 TRBV7-3A0A075B6L6 115 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 IGHV3-21A0A0B4J1V1 117 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 C3orf85A0A1B0GTC6 90 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 TRDV1A0A1B0GX56 115 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 GYG2O15488 501 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 ATP5HO75947 161 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SPINK1P00995 79 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 MT-ND6P03923 174 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 GPX1P07203 203 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SFTA3P0C7M3 94 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SULT1A3P0DMM9 295 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SULT1A4P0DMN0 295 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 ZNF25P17030 456 aaPredicted RBP0.79□□□□□ -2.28
CD44-212ENST00000524922 RAB3BP20337 219 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 MYL9P24844 172 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 HLA-DMAP28067 261 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 CSN1S1P47710 185 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 FXYD7P58549 80 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 RAB2AP61019 212 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 UBE2D3P61077 147 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 UBE2MP61081 183 aaKnown RBP0.79□□□□□ -2.28
CD44-212ENST00000524922 TSPAN5P62079 268 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 UBE2D2P62837 147 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 MRPS10P82664 201 aaKnown RBP0.79□□□□□ -2.28
CD44-212ENST00000524922 ZNF90Q03938 601 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 MOBPQ13875 183 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SMCO1Q147U7 214 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 FAM159AQ6UWV7 190 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 TMEM91Q6ZNR0 172 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 LINC00173Q6ZV60 143 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SNX29P2Q8IUI4 249 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 LINC00337Q8N6G1 96 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 OR1L4Q8NGR5 311 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 LHFPL5Q8TAF8 219 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms