RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TMEM105Q8N8V8 129 aa10.17□□□□□ -0.78
PABPC1-208ENST00000519004 BUB1B-PAK6H3BSN5 160 aa10.17□□□□□ -0.78
PABPC1-208ENST00000519004 PPP1R17O96001 155 aa10.17□□□□□ -0.78
PABPC1-208ENST00000519004 MAFAQ8NHW3 353 aaPredicted RBP10.17□□□□□ -0.78
PABPC1-208ENST00000519004 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
PABPC1-208ENST00000519004 CACNA1GO43497 2377 aa10.16□□□□□ -0.78
PABPC1-208ENST00000519004 TRBV7-1A0A0A6YYK4 115 aa10.16□□□□□ -0.78
PABPC1-208ENST00000519004 ATOX1O00244 68 aa10.16□□□□□ -0.78
PABPC1-208ENST00000519004 CTSGP08311 255 aa10.16□□□□□ -0.78
PABPC1-208ENST00000519004 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
PABPC1-208ENST00000519004 MRAPQ8TCY5 172 aa10.16□□□□□ -0.78
PABPC1-208ENST00000519004 DSCR8Q96T75 97 aa10.16□□□□□ -0.78
PABPC1-208ENST00000519004 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
PABPC1-208ENST00000519004 RNF5Q99942 180 aa10.15□□□□□ -0.78
PABPC1-208ENST00000519004 DMDP11532 3685 aa10.15□□□□□ -0.78
PABPC1-208ENST00000519004 SMG1Q96Q15 3661 aaKnown RBP10.15□□□□□ -0.78
PABPC1-208ENST00000519004 IGHV3-35A0A0C4DH35 117 aa10.15□□□□□ -0.79
PABPC1-208ENST00000519004 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.79
PABPC1-208ENST00000519004 TIMM21Q9BVV7 248 aa10.15□□□□□ -0.79
PABPC1-208ENST00000519004 KALRNO60229 2985 aa10.15□□□□□ -0.79
PABPC1-208ENST00000519004 COL27A1Q8IZC6 1860 aaPredicted RBP10.14□□□□□ -0.79
PABPC1-208ENST00000519004 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 FAM19A4Q96LR4 140 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 DUX5Q96PT3 197 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 OPRPNQ99935 248 aaPredicted RBP10.14□□□□□ -0.79
PABPC1-208ENST00000519004 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 TMEM178BH3BS89 294 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 BUB3O43684 328 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 IGF1P05019 195 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 PRSS2P07478 247 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 RHOHQ15669 191 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 UPK3BQ9BT76 320 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 PHLDA3Q9Y5J5 127 aa10.14□□□□□ -0.79
PABPC1-208ENST00000519004 LINC00315P59091 139 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 IGHV4OR15-8A0A075B7B6 117 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 A0A087WW49 117 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 IGHV3-66A0A0C4DH42 116 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 TMEM61Q8N0U2 210 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 SIT1Q9Y3P8 196 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 PLCE1Q9P212 2302 aa10.13□□□□□ -0.79
PABPC1-208ENST00000519004 IGHV1-69P01742 117 aa10.12□□□□□ -0.79
PABPC1-208ENST00000519004 S100A4P26447 101 aaKnown RBP10.12□□□□□ -0.79
PABPC1-208ENST00000519004 MRPL53Q96EL3 112 aaKnown RBP10.12□□□□□ -0.79
PABPC1-208ENST00000519004 KIF25-AS1Q9Y6Z4 181 aa10.12□□□□□ -0.79
PABPC1-208ENST00000519004 VCYO14598 125 aa10.12□□□□□ -0.79
PABPC1-208ENST00000519004 NBR2O15453 112 aa10.12□□□□□ -0.79
PABPC1-208ENST00000519004 UCNP55089 124 aa10.12□□□□□ -0.79
PABPC1-208ENST00000519004 PRRC2CQ9Y520 2896 aaKnown RBP10.11□□□□□ -0.79
PABPC1-208ENST00000519004 COX7A1P24310 79 aa10.11□□□□□ -0.79
PABPC1-208ENST00000519004 MIAQ16674 131 aa10.11□□□□□ -0.79
PABPC1-208ENST00000519004 SPENQ96T58 3664 aaKnown RBP10.11□□□□□ -0.79
PABPC1-208ENST00000519004 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
PABPC1-208ENST00000519004 NPC2P61916 151 aa10.11□□□□□ -0.79
PABPC1-208ENST00000519004 RPL18AQ02543 176 aaKnown RBP10.11□□□□□ -0.79
PABPC1-208ENST00000519004 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
PABPC1-208ENST00000519004 CCL17Q92583 94 aa10.11□□□□□ -0.79
PABPC1-208ENST00000519004 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
PABPC1-208ENST00000519004 LY6LH3BQJ8 138 aa10.1□□□□□ -0.79
PABPC1-208ENST00000519004 NDPQ00604 133 aa10.1□□□□□ -0.79
PABPC1-208ENST00000519004 ASCL5Q7RTU5 278 aa10.1□□□□□ -0.79
PABPC1-208ENST00000519004 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
PABPC1-208ENST00000519004 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
PABPC1-208ENST00000519004 SUMO4Q6EEV6 95 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
PABPC1-208ENST00000519004 DAZ1Q9NQZ3 744 aaKnown RBP10.09□□□□□ -0.79
PABPC1-208ENST00000519004 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
PABPC1-208ENST00000519004 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 IGHV3OR16-13A0A075B7E8 117 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 IGHV3-74A0A0B4J1X5 117 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 PATE3B3GLJ2 98 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
PABPC1-208ENST00000519004 C22orf34Q6ZV56 151 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 SEM1Q6ZVN7 128 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 ZFAND2AQ8N6M9 145 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 JPT2Q9H910 190 aa10.09□□□□□ -0.79
PABPC1-208ENST00000519004 CLPSL1A2RUU4 121 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 ATP1A1-AS1Q5TC04 95 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 KAAG1Q9UBP8 84 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 MBD3L4A6NDZ8 208 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-208ENST00000519004 MBD3L3A6NE82 208 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-208ENST00000519004 MBD3L5A6NJ08 208 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-208ENST00000519004 DAND5Q8N907 189 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 NPBQ8NG41 125 aa10.08□□□□□ -0.8
PABPC1-208ENST00000519004 TRAV21A0A0B4J279 112 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 GNRH2O43555 120 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 NXPH4O95158 308 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 TIRAPP58753 221 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 SERP2Q8N6R1 65 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 ZNF576Q9H609 170 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 ARHGAP32A7KAX9 2087 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 A0A1W2PNU3 283 aaPredicted RBP10.07□□□□□ -0.8
PABPC1-208ENST00000519004 K7ENP7 123 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 LENEPQ9Y5L5 61 aa10.07□□□□□ -0.8
PABPC1-208ENST00000519004 TNRC18O15417 2968 aaPredicted RBP10.06□□□□□ -0.8
PABPC1-208ENST00000519004 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms