RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 A0A1W2PPB8 328 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 A0A1W2PRS3 328 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 BBIP1A8MTZ0 92 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 KIR3DP1A8MWS1 328 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 H7BYZ3 331 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 PGRMC1O00264 195 aaKnown RBP0.24□□□□□ -2.37
SKP1-203ENST00000517625 SPRR2DP22532 72 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 RPS3P23396 243 aaKnown RBP eCLIP0.24□□□□□ -2.372e-11■■□□□ 12.7
SKP1-203ENST00000517625 S100A11P31949 105 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 QRFPP83859 136 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 C3orf62Q6ZUJ4 267 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 LINC00305Q7Z4B0 112 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 CLEC2BQ92478 149 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 CENPHQ9H3R5 247 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 LYSTQ99698 3801 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 CUL7Q14999 1698 aa0.24□□□□□ -2.37
SKP1-203ENST00000517625 SSC5DA1L4H1 1573 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 UNC13BO14795 1591 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 DNAH7Q8WXX0 4024 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.23□□□□□ -2.37
SKP1-203ENST00000517625 TRAV13-1A0A0B4J241 112 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 A0A1W2PRE2 83 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 PRORSD1PA6NEY8 169 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 IFITM5A6NNB3 132 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 H3BMG7 143 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 EVI2AP22794 236 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 SNRPD3P62318 126 aaKnown RBP0.23□□□□□ -2.37
SKP1-203ENST00000517625 STX12Q86Y82 276 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.23□□□□□ -2.37
SKP1-203ENST00000517625 MORN4Q8NDC4 146 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 TSKUQ8WUA8 353 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 DYNC2H1Q8NCM8 4307 aaKnown RBP0.23□□□□□ -2.37
SKP1-203ENST00000517625 COL14A1Q05707 1796 aaKnown RBP0.23□□□□□ -2.37
SKP1-203ENST00000517625 ZC3H13Q5T200 1668 aaKnown RBP0.23□□□□□ -2.37
SKP1-203ENST00000517625 PKD1P98161 4303 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 FAM135AQ9P2D6 1515 aa0.23□□□□□ -2.37
SKP1-203ENST00000517625 MAGI2Q86UL8 1455 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 DSPPQ9NZW4 1301 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 IGF2P01344 180 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 GNG10P50151 68 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 ASB16-AS1Q495Z4 193 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 TOMM20LQ6UXN7 152 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 THEM6Q8WUY1 208 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 NABP2Q9BQ15 211 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 MED31Q9Y3C7 131 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 PREX2Q70Z35 1606 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 DIP2BQ9P265 1576 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 AKAP9Q99996 3911 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 CASZ1Q86V15 1759 aa0.22□□□□□ -2.37
SKP1-203ENST00000517625 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.21□□□□□ -2.38
SKP1-203ENST00000517625 NUP210LQ5VU65 1888 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 ETV6P41212 452 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 GLYATL3Q5SZD4 288 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 OR9Q1Q8NGQ5 310 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 SMPXQ9UHP9 88 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 V9GYQ6 96 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 CMYA5Q8N3K9 4069 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 KNL1Q8NG31 2342 aa0.21□□□□□ -2.38
SKP1-203ENST00000517625 TCOF1Q13428 1488 aaKnown RBP0.21□□□□□ -2.38
SKP1-203ENST00000517625 TMEM189A5PLL7 270 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 HIGD1CA8MV81 97 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 G0S2P27469 103 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 RPL37P61927 97 aaKnown RBP0.2□□□□□ -2.38
SKP1-203ENST00000517625 TFAMQ00059 246 aaKnown RBP0.2□□□□□ -2.38
SKP1-203ENST00000517625 CSAG1Q6PB30 78 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 SPINK6Q6UWN8 80 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 OR8J3Q8NGG0 315 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 MRPL36Q9P0J6 103 aaKnown RBP0.2□□□□□ -2.38
SKP1-203ENST00000517625 MARF1Q9Y4F3 1742 aaKnown RBP0.2□□□□□ -2.38
SKP1-203ENST00000517625 FGD6Q6ZV73 1430 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 LRRC37A3O60309 1634 aa0.2□□□□□ -2.38
SKP1-203ENST00000517625 CACNA1CQ13936 2221 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 N4BP2Q86UW6 1770 aaPredicted RBP0.19□□□□□ -2.38
SKP1-203ENST00000517625 ANK2Q01484 3957 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 NUP188Q5SRE5 1749 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 TMEM30CPA0ZSE6 113 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 POLR2HP52434 150 aaKnown RBP0.19□□□□□ -2.38
SKP1-203ENST00000517625 GTF2A1P52655 376 aaPredicted RBP0.19□□□□□ -2.38
SKP1-203ENST00000517625 BLCAPP62952 87 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 RHOHQ15669 191 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 Q5XG85 94 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 PPP1R2P3Q6NXS1 205 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 OR5A2Q8NGI9 324 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 NAT14Q8WUY8 206 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 DMAC1Q96GE9 116 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 SMIM7Q9BQ49 75 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 PEG3Q9GZU2 1588 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 FAT2Q9NYQ8 4349 aa0.19□□□□□ -2.38
SKP1-203ENST00000517625 SPHKAPQ2M3C7 1700 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 BCORL1Q5H9F3 1711 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 ASXL3Q9C0F0 2248 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 FANCMQ8IYD8 2048 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 A2MP01023 1474 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 ABCC10Q5T3U5 1492 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 LAMC1P11047 1609 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 PAPPAQ13219 1627 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 LOC107984156A0A0G2JMH3 177 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 A0A1B0GV72 72 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 SLC25A4P12235 298 aa0.18□□□□□ -2.38
SKP1-203ENST00000517625 CRYGSP22914 178 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 312.7 ms