RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ATP6V0E2Q8NHE4 81 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 SPCS1Q9Y6A9 102 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 PCSK5Q92824 1860 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZFP92A6NM28 416 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 H3BMM0 161 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 SLC25A20O43772 301 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 IL5P05113 134 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 WFDC2Q14508 124 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 C2orf91Q6ZV80 131 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 UBE2WQ96B02 151 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 IMMP2LQ96T52 175 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 SPEGQ15772 3267 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGLV3-32A0A0A0MS00 114 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF736B4DX44 427 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 PIPP12273 146 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF20P17024 532 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF322Q6U7Q0 402 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 Q8N8P6 123 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 SERF1AO75920 110 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGHV1-8P0DP01 117 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGHV3-30-3P0DP02 117 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 C11orf87Q6NUJ2 197 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 HEPN1Q6WQI6 88 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 VSTM2AQ8TAG5 236 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 YPEL2Q96QA6 119 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 CMC2Q9NRP2 79 aa4.23□□□□□ -1.73
TRAPPC11-209ENST00000512476 ARHGAP21Q5T5U3 1957 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 OTOGLQ3ZCN5 2332 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 FRYLO94915 3013 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGKV2D-26A0A0A0MRZ7 120 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 SDCBPO00560 298 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 ASAH2BP0C7U1 165 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 SLC25A16P16260 332 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 CKS2P33552 79 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 COPS9Q8WXC6 57 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 PROK2Q9HC23 129 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 PTPRBP23467 1997 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 TRAV3A0A0B4J244 114 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 M0R233 179 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 GNRH2O43555 120 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGHV1-69P01742 117 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 P0C879 139 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 CFC1P0CG37 223 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 RPS10P46783 165 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 DPPA3Q6W0C5 159 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 OR2T35Q8NGX2 323 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 CACNA1HO95180 2353 aa4.22□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 K7ERS5 55 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 ADIRFQ15847 76 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 OR10AG1Q8NH19 301 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 ZNF581Q9P0T4 197 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 CPAMD8Q8IZJ3 1885 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGLV1-50A0A075B6I6 118 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 A0A0C4DFX4 3053 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 TMEM235A6NFC5 223 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 A8MUU9 505 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 BPY2O14599 106 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 YPEL1O60688 119 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGLV1-51P01701 117 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGKCP01834 107 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 TFF1P04155 84 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 LYZL1Q6UWQ5 148 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 LYZL2Q7Z4W2 148 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 FAM19A2Q8N3H0 131 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 CHCHD7Q9BUK0 85 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 TAS2R4Q9NYW5 299 aa4.21□□□□□ -1.74
TRAPPC11-209ENST00000512476 MUC21A0A140T8X8 626 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 SH2D1AO60880 128 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 POM121L12Q8N7R1 296 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 Q96M85 177 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 LITAFQ99732 161 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 ST20Q9HBF5 79 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 MALRD1Q5VYJ5 2156 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 J3QRE1 110 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 K7EM74 188 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 ASIPP42127 132 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 DSCR4P56555 118 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 MED12LQ86YW9 2145 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 Q8N814 137 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 Q8NDZ9 215 aa4.2□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGKV1OR2-108A0A075B7D4 117 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 FXYD7P58549 80 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 LGALSLQ3ZCW2 172 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 SMCR5Q8TEV8 140 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 A0A1W2PPM0 123 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 A6NDX4 124 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 SPINK14Q6IE38 97 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 Q8N9W7 124 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 OR8B3Q8NGG8 313 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 SPTSSAQ969W0 71 aa4.19□□□□□ -1.74
TRAPPC11-209ENST00000512476 UBE2L5PA0A1B0GUS4 154 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 C17orf98A8MV24 154 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 UBE2L3P68036 154 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 MRPS36P82909 103 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms