RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 LRP2P98164 4655 aa4.39□□□□□ -1.71
COPS4-209ENST00000511653 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 IBA57-AS1B1ANH7 110 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 C9JCJ5 164 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 EIF3GO75821 320 aaKnown RBP eCLIP4.38□□□□□ -1.71
COPS4-209ENST00000511653 GATA1P15976 413 aaPredicted RBP4.38□□□□□ -1.71
COPS4-209ENST00000511653 S100A11P31949 105 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 PPT1P50897 306 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 Q6AWC8 147 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 Q6ZSA8 131 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 STX12Q86Y82 276 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 TXNDC17Q9BRA2 123 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 PAXXQ9BUH6 204 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 OR51M1Q9H341 326 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
COPS4-209ENST00000511653 KRBOX1C9JBD0 128 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 LECT2O14960 151 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 GNRH2O43555 120 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 PVALBP20472 110 aaPredicted RBP4.38□□□□□ -1.71
COPS4-209ENST00000511653 RANP62826 216 aaKnown RBP4.38□□□□□ -1.71
COPS4-209ENST00000511653 HBG1P69891 147 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 HBG2P69892 147 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 LINC01620Q4KN68 170 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 FAM159AQ6UWV7 190 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 OR4C5Q8NGB2 326 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 SPXQ9BT56 116 aa4.38□□□□□ -1.71
COPS4-209ENST00000511653 RBAKDNA6NC62 111 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 IFITM10A6NMD0 228 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 F6UZH7 168 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 M0R2P5 195 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 OR7C2O60412 319 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 TYMSP04818 313 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 GIPP09681 153 aaPredicted RBP4.37□□□□□ -1.71
COPS4-209ENST00000511653 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
COPS4-209ENST00000511653 UBE2L3P68036 154 aaKnown RBP4.37□□□□□ -1.71
COPS4-209ENST00000511653 TDRG1Q3Y452 100 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 OR10J3Q5JRS4 329 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 DPPA3Q6W0C5 159 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 SLC25A29Q8N8R3 303 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 OR5C1Q8NGR4 320 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 TVP23CQ96ET8 276 aa4.37□□□□□ -1.71
COPS4-209ENST00000511653 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
COPS4-209ENST00000511653 HMSDA8MTL9 139 aa4.36□□□□□ -1.71
COPS4-209ENST00000511653 S100A9P06702 114 aaKnown RBP4.36□□□□□ -1.71
COPS4-209ENST00000511653 ATP6V1FQ16864 119 aa4.36□□□□□ -1.71
COPS4-209ENST00000511653 SCXQ7RTU7 201 aa4.36□□□□□ -1.71
COPS4-209ENST00000511653 OR2T35Q8NGX2 323 aa4.36□□□□□ -1.71
COPS4-209ENST00000511653 OR5AC2Q9NZP5 309 aa4.36□□□□□ -1.71
COPS4-209ENST00000511653 RPH3ALQ9UNE2 315 aa4.36□□□□□ -1.71
COPS4-209ENST00000511653 TRAV8-1A0A0A6YYK1 113 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 IGHV3-73A0A0B4J1V6 119 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 CSN1S1P47710 185 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 RAB14P61106 215 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
COPS4-209ENST00000511653 FLI1Q01543 452 aaPredicted RBP4.35□□□□□ -1.71
COPS4-209ENST00000511653 CFAP126Q5VTH2 177 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 STPG4Q8N801 248 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 DEFB104AQ8WTQ1 72 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 WDR61Q9GZS3 305 aaKnown RBP4.35□□□□□ -1.71
COPS4-209ENST00000511653 LENEPQ9Y5L5 61 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 TRAV8-6A0A0B4J262 113 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 FBLL1A6NHQ2 334 aaKnown RBP4.35□□□□□ -1.71
COPS4-209ENST00000511653 SIX6O95475 246 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 IGLV2-11P01706 119 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 GNG5P63218 68 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 S100A12P80511 92 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 LAGE3Q14657 143 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 RHOHQ15669 191 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 LELP1Q5T871 98 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 GOLT1AQ6ZVE7 132 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 SH2D6Q7Z4S9 175 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.35□□□□□ -1.71
COPS4-209ENST00000511653 ASB13Q8WXK3 278 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 DNAJC30Q96LL9 226 aa4.35□□□□□ -1.71
COPS4-209ENST00000511653 TRAV21A0A0B4J279 112 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 RS1O15537 224 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 PFN1P07737 140 aaKnown RBP4.34□□□□□ -1.71
COPS4-209ENST00000511653 ZNF80P51504 273 aaPredicted RBP4.34□□□□□ -1.71
COPS4-209ENST00000511653 ZNF876PQ49A33 203 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 LRRC37A5PQ49AS3 106 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 FFAR4Q5NUL3 377 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 ATRAIDQ6UW56 229 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
COPS4-209ENST00000511653 TMEM75Q8N9X5 138 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 DAZ3Q9NR90 486 aaKnown RBP4.34□□□□□ -1.71
COPS4-209ENST00000511653 Q9UF83 564 aa4.34□□□□□ -1.71
COPS4-209ENST00000511653 TRBV6-4A0A1B0GX49 114 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 SSNA1O43805 119 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 LINC00694P0DN24 101 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 KHDC3LQ587J8 217 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 ZNF506Q5JVG8 444 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 ATP6V0E2Q8NHE4 81 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 BAALCQ8WXS3 180 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 PRADC1Q9BSG0 188 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms