RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	SSPO	A2VEC9	5147 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	TRBV6-8	A0A0A6YYG3	113 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	TRAV34	A0A0B4J273	112 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	PTTG1	O95997	202 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	CSN1S1	P47710	185 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	TAS2R19	P59542	299 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	RBX1	P62877	108 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	SRPX	P78539	464 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	CYCS	P99999	105 aa	Known RBP	4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	GAGE6	Q13070	117 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	PDE6H	Q13956	83 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	ZFP2	Q6ZN57	461 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	TMEM229B	Q8NBD8	167 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	PRR34	Q9NV39	138 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	MTFP1	Q9UDX5	166 aa		4.17	□□□□□ -1.74
KATNA1-208	ENST00000494504	USH2A	O75445	5202 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	FAM25A	B3EWG3	89 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	FAM25C	B3EWG5	89 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	FAM25G	B3EWG6	89 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	DISC1	C4P0D8	188 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504		H0Y9J4	135 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	SSSCA1	O60232	199 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	HPGDS	O60760	199 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	KRTAP1-4	P0C5Y4	121 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	VPREB1	P12018	145 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	ANXA3	P12429	323 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	CAMLG	P49069	296 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	AQP4	P55087	323 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	LSM3	P62310	102 aa	Known RBP	4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	REG3A	Q06141	175 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	ARL16	Q0P5N6	197 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	PAPPA-AS1	Q5QFB9	102 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	FAM74A4	Q5TZK3	123 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	C15orf56	Q8N910	161 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	OR1L4	Q8NGR5	311 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	BCL7B	Q9BQE9	202 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504		Q9H521	79 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	TMEM14C	Q9P0S9	112 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504	RABL2B	Q9UNT1	228 aa		4.16	□□□□□ -1.74
KATNA1-208	ENST00000494504		A8MWV9	139 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	APOA1	P02647	267 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	IGLV7-43	P04211	117 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	NBEAP1	P0C6P0	100 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	RPL13A	P40429	203 aa	Known RBP	4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	RAN	P62826	216 aa	Known RBP	4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	PRR27	Q6MZM9	219 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	UFSP1	Q6NVU6	142 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	NRARP	Q7Z6K4	114 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	PHYHIPL	Q96FC7	376 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	HYLS1	Q96M11	299 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	CNBD2	Q96M20	576 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	LINC00474	Q9P2X8	69 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	BLOC1S6	Q9UL45	172 aa		4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	SYNE2	Q8WXH0	6885 aa	Known RBP	4.15	□□□□□ -1.75
KATNA1-208	ENST00000494504	IGLV7-46	A0A075B6I9	117 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504		A0A1W2PNN7	141 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	RBAKDN	A6NC62	111 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	RNASE3	P12724	160 aa	Known RBP	4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	UBE2D3	P61077	147 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	UBE2D2	P62837	147 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	EIF5A	P63241	154 aa	Known RBP	4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	GAGE2B	Q13066	116 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	GCSAML	Q5JQS6	135 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	PHF5A	Q7RTV0	110 aa	Known RBP	4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	TVP23C	Q96ET8	276 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	PFDN5	Q99471	154 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	SLC25A2	Q9BXI2	301 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	NMES1	Q9C002	83 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	TREM1	Q9NP99	234 aa		4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.14	□□□□□ -1.75
KATNA1-208	ENST00000494504	TRBV7-3	A0A075B6L6	115 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504		A0A1B0GUV1	79 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	FNDC10	F2Z333	226 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	CFC1B	P0CG36	223 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	SLC25A6	P12236	298 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	S100A10	P60903	97 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	TPRXL	Q17RH7	258 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	TMEM14EP	Q6UXP3	125 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	LINC00526	Q96FQ7	95 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	DIRAS2	Q96HU8	199 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	SGK494	Q96LW2	274 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504	LENEP	Q9Y5L5	61 aa		4.13	□□□□□ -1.75
KATNA1-208	ENST00000494504		A0A087WZ39	114 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	IGKV3OR2-268	A0A0C4DH90	116 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	DUXB	A0A1W2PPF3	345 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	TSC22D2	O75157	780 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	S100A4	P26447	101 aa	Known RBP	4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	ZNF80	P51504	273 aa	Predicted RBP	4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	RAB2A	P61019	212 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	PKIA	P61925	76 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	MT1H	P80294	61 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	ZNF674	Q2M3X9	581 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	MIR17HG	Q75NE6	70 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	THAP6	Q8TBB0	222 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	DYNC2LI1	Q8TCX1	351 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	PTH2	Q96A98	100 aa		4.12	□□□□□ -1.75
KATNA1-208	ENST00000494504	SMIM8	Q96KF7	97 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms