RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 GAGE4Q13068 117 aa11.18□□□□□ -0.62
SMTN-219ENST00000493335 CITED1Q99966 193 aa11.18□□□□□ -0.62
SMTN-219ENST00000493335 TRBV7-1A0A0A6YYK4 115 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 NDUFA11Q86Y39 141 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 A8MWV9 139 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
SMTN-219ENST00000493335 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 CRYGDP07320 174 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 EBI3Q14213 229 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 A0A0J9YY99 117 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 CD7P09564 240 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 PPDPFLQ8WWR9 84 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
SMTN-219ENST00000493335 TRBV20-1A0A075B6N2 111 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 OOSP1A8MZH6 123 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 C9JAW5 83 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 UBE2D1P51668 147 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 TRPT1Q86TN4 253 aaKnown RBP11.15□□□□□ -0.62
SMTN-219ENST00000493335 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 CFC1P0CG37 223 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 PF4V1P10720 104 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
SMTN-219ENST00000493335 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
SMTN-219ENST00000493335 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
SMTN-219ENST00000493335 CENPVL3A0A0U1RRI6 287 aa11.15□□□□□ -0.63
SMTN-219ENST00000493335 TSHBP01222 138 aa11.15□□□□□ -0.63
SMTN-219ENST00000493335 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.63
SMTN-219ENST00000493335 HTN1P15515 57 aa11.15□□□□□ -0.63
SMTN-219ENST00000493335 TCF15Q12870 199 aa11.15□□□□□ -0.63
SMTN-219ENST00000493335 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.63
SMTN-219ENST00000493335 ANKRD29Q8N6D5 301 aa11.15□□□□□ -0.63
SMTN-219ENST00000493335 RHODO00212 210 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 AJUBAQ96IF1 538 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 COX6B1P14854 86 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 PMVKQ15126 192 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 ZNF56Q15929 161 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 TEN1Q86WV5 123 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 GPHB5Q86YW7 130 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
SMTN-219ENST00000493335 BPESC1Q9GZL8 116 aa11.14□□□□□ -0.63
SMTN-219ENST00000493335 CHD8Q9HCK8 2581 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 UBE2E1P51965 193 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 EDN2P20800 178 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 CRIP2P52943 208 aaPredicted RBP11.13□□□□□ -0.63
SMTN-219ENST00000493335 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
SMTN-219ENST00000493335 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 ZNF688P0C7X2 276 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 A4D1N5 150 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 J3QQQ9 107 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 NPFFO15130 113 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 PRSS2P07478 247 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 PRO1854Q9UHT4 67 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 OVOL1O14753 267 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 NPC2P61916 151 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 HIVEP3Q5T1R4 2406 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 C10orf126Q8N4M7 172 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 C5orf56Q8N8D9 126 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 VPREB3Q9UKI3 123 aa11.12□□□□□ -0.63
SMTN-219ENST00000493335 CRYBG3Q68DQ2 2970 aa11.11□□□□□ -0.63
SMTN-219ENST00000493335 MUC4Q99102 2169 aa11.11□□□□□ -0.63
SMTN-219ENST00000493335 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
SMTN-219ENST00000493335 ITLN2Q8WWU7 325 aaPredicted RBP11.11□□□□□ -0.63
SMTN-219ENST00000493335 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
SMTN-219ENST00000493335 UBE2D3P61077 147 aa11.11□□□□□ -0.63
SMTN-219ENST00000493335 UBE2D2P62837 147 aa11.11□□□□□ -0.63
SMTN-219ENST00000493335 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 VCX2Q9H322 139 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 PPDPFQ9H3Y8 114 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 ZNF580Q9UK33 172 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 LINC01619G3V211 115 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 SLC25A20O43772 301 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 U3KQE9 123 aa11.1□□□□□ -0.63
SMTN-219ENST00000493335 VCYO14598 125 aa11.09□□□□□ -0.63
SMTN-219ENST00000493335 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
SMTN-219ENST00000493335 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
SMTN-219ENST00000493335 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
SMTN-219ENST00000493335 IGIPA6NJ69 53 aa11.09□□□□□ -0.63
SMTN-219ENST00000493335 PPP1R17O96001 155 aa11.09□□□□□ -0.63
SMTN-219ENST00000493335 IGHV3-73A0A0B4J1V6 119 aa11.08□□□□□ -0.63
SMTN-219ENST00000493335 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.63
SMTN-219ENST00000493335 ATP5J2P56134 94 aa11.08□□□□□ -0.63
SMTN-219ENST00000493335 RNASE13Q5GAN3 156 aaKnown RBP11.08□□□□□ -0.63
SMTN-219ENST00000493335 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.63
SMTN-219ENST00000493335 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.63
SMTN-219ENST00000493335 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms