RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TRACP01848 142 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 IFI27P40305 119 aaPredicted RBP2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 ZNF138P52744 262 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 ATXN8Q156A1 80 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 Q8IYB0 196 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM86BQ8N661 226 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 FXYD5Q96DB9 178 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 RTL8AQ9BWD3 113 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 EDA2RQ9HAV5 297 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 KLF13Q9Y2Y9 288 aaPredicted RBP2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 NCKAP5O14513 1909 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 SCN10AQ9Y5Y9 1956 aa2.4□□□□□ -2.03
ECHDC1-217ENST00000488087 MUC22E2RYF6 1773 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 SHANK1Q9Y566 2161 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 A0A0B4J2C4 111 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 CCL15-CCL14A0A0B4J2E2 113 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV3-66A0A0C4DH42 116 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 LOC107984156A0A0G2JMH3 177 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 TRBV30A0A0K0K1B3 111 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 RBAKDNA6NC62 111 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 PGPA6NDG6 321 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 OOSP1A8MZH6 123 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 F8VRH5 84 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 H3BMM0 161 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 UPK2O00526 184 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 TCRAP04437 139 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 COX6B1P14854 86 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 EFNA4P52798 201 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 PCBD1P61457 104 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 PPP1CAP62136 330 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 GNG5P63218 68 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 LOXL1Q08397 574 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 IGFL3Q6UXB1 125 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 ZFP2Q6ZN57 461 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 GOLT1AQ6ZVE7 132 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 RPS19BP1Q86WX3 136 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 ARL17AQ8IVW1 177 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 C1orf158Q8N1D5 194 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 Q8N8P6 123 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 UBE2WQ96B02 151 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 FAM19A4Q96LR4 140 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 EMC6Q9BV81 110 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 CNFNQ9BYD5 112 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 AGPAT4-IT1Q9H0P7 198 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM14BQ9NUH8 114 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM14CQ9P0S9 112 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 TP53TG1Q9Y2A0 90 aa2.39□□□□□ -2.03
ECHDC1-217ENST00000488087 C2orf16Q68DN1 1984 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 FREM3P0C091 2139 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 NUMA1Q14980 2115 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 ARID1AO14497 2285 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 IGLV2-18A0A075B6J9 118 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 TRAV8-1A0A0A6YYK1 113 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 FAM236AA0A1B0GUQ0 79 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 FAM236BA0A1B0GV22 79 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM30CPA0ZSE6 113 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 D6R8Y8 96 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 ENSAO43768 121 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 BCE1O60756 84 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 NDUFC2O95298 119 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 PRR3P79522 188 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 CCL8P80075 99 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 MRPS36P82909 103 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 RPL18AQ02543 176 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 NNATQ16517 81 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 LINC00322Q6ZN03 302 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 AAED1Q7RTV5 226 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 Q86TA4 180 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 LYPD1Q8N2G4 141 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 SLC25A45Q8N413 288 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 SLC25A29Q8N8R3 303 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM75Q8N9X5 138 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 COPS9Q8WXC6 57 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 SHANK2-AS3Q9BTD1 123 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 OTORQ9NRC9 128 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 NCOA6Q14686 2063 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 PTPRSQ13332 1948 aa2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 TNRC6BQ9UPQ9 1833 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-217ENST00000488087 DOCK11Q5JSL3 2073 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV3-74A0A0B4J1X5 117 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 TRAV13-1A0A0B4J241 112 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 A0A0J9YX75 114 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 A0A0J9YY99 117 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 J3QQQ9 107 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 J3QT63 122 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV3-30P01768 117 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV3-33P01772 117 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 ARMS2P0C7Q2 107 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV3-30-5P0DP03 117 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 COX6A1P12074 109 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 CKS2P33552 79 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 ZNF137PP52743 207 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 PRCDQ00LT1 54 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 ZNF816Q0VGE8 651 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms