RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 PRAC2D3DTV9 90 aa10.34□□□□□ -0.75
HDLBP-241ENST00000487169 DNAH14Q0VDD8 3507 aa10.34□□□□□ -0.75
HDLBP-241ENST00000487169 PRRC2CQ9Y520 2896 aaKnown RBP10.33□□□□□ -0.76
HDLBP-241ENST00000487169 Q6ZVH6 145 aa10.33□□□□□ -0.76
HDLBP-241ENST00000487169 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
HDLBP-241ENST00000487169 DEFB1P60022 68 aa10.33□□□□□ -0.76
HDLBP-241ENST00000487169 PRORYQ9H606 182 aa10.33□□□□□ -0.76
HDLBP-241ENST00000487169 PRSS29PA6NIE9 313 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 F8WEM9 126 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 J3QQQ9 107 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 GPHB5Q86YW7 130 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 DKK2Q9UBU2 259 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 K7EMT4 169 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 ZNF747Q9BV97 191 aa10.32□□□□□ -0.76
HDLBP-241ENST00000487169 TMEM131Q92545 1883 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 TMEM61Q8N0U2 210 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 UTF1Q5T230 341 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 H3BMM0 161 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 HERVK_113P63121 156 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 OCIAD2Q56VL3 154 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 DNAJC30Q96LL9 226 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 SZT2Q5T011 3432 aa10.31□□□□□ -0.76
HDLBP-241ENST00000487169 XIRP2A4UGR9 3374 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-241ENST00000487169 IGKV2-29A2NJV5 120 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-241ENST00000487169 CCL25O15444 150 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 COX8AP10176 69 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 XCL1P47992 114 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 LOXL1Q08397 574 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-241ENST00000487169 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 WI2-2373I1.2A0A1W2PRP0 233 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 GAGE2BQ13066 116 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-241ENST00000487169 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 KLF12Q9Y4X4 402 aa10.3□□□□□ -0.76
HDLBP-241ENST00000487169 TNFRSF13BO14836 293 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-241ENST00000487169 Q6ZPA2 131 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 NKAPP1Q8N9T2 125 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 RPL39LQ96EH5 51 aaKnown RBP10.29□□□□□ -0.76
HDLBP-241ENST00000487169 OVOL2Q9BRP0 275 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 TRIOO75962 3097 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 ESM1Q9NQ30 184 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 TRBV12-3P01733 135 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 SPINK8P0C7L1 97 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 SPART-AS1P0CW21 52 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 HIST1H4AP62805 103 aaKnown RBP10.29□□□□□ -0.76
HDLBP-241ENST00000487169 Q9HAA7 133 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 F8P00451 2351 aa10.29□□□□□ -0.76
HDLBP-241ENST00000487169 A6NDX4 124 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 LINC01548A6NM66 108 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 Q6ZQT7 251 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 C5orf38Q86SI9 138 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 Q8N1Y9 231 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 RMI2Q96E14 147 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 IGKV2D-24A0A075B6R9 120 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 RNF152Q8N8N0 203 aa10.28□□□□□ -0.76
HDLBP-241ENST00000487169 ATP5G1P05496 136 aa10.27□□□□□ -0.76
HDLBP-241ENST00000487169 BRWD1-AS2P59051 145 aa10.27□□□□□ -0.76
HDLBP-241ENST00000487169 K7EMI3 77 aa10.27□□□□□ -0.77
HDLBP-241ENST00000487169 LINC00574Q9H8X3 128 aa10.27□□□□□ -0.77
HDLBP-241ENST00000487169 TMEM89A2RUT3 159 aa10.27□□□□□ -0.77
HDLBP-241ENST00000487169 GYPEP15421 78 aa10.27□□□□□ -0.77
HDLBP-241ENST00000487169 MYCNOSP40205 109 aa10.27□□□□□ -0.77
HDLBP-241ENST00000487169 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.77
HDLBP-241ENST00000487169 ZNF295-AS1Q8N0V1 137 aa10.26□□□□□ -0.77
HDLBP-241ENST00000487169 FGF6P10767 208 aa10.26□□□□□ -0.77
HDLBP-241ENST00000487169 ATP6V0E2Q8NHE4 81 aa10.26□□□□□ -0.77
HDLBP-241ENST00000487169 P0C879 139 aa10.26□□□□□ -0.77
HDLBP-241ENST00000487169 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
HDLBP-241ENST00000487169 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
HDLBP-241ENST00000487169 PRO1854Q9UHT4 67 aa10.26□□□□□ -0.77
HDLBP-241ENST00000487169 C9orf47Q6ZRZ4 202 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 KIAA1549Q9HCM3 1950 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 DEFB135Q30KP9 77 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 C1orf43Q9BWL3 253 aa10.25□□□□□ -0.77
HDLBP-241ENST00000487169 TMEM126AQ9H061 195 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 TRAV25A0A0B4J276 109 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 C10orf142B7Z368 130 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 MAJINQ3KP22 176 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 IGKV1D-37A0A075B6S9 117 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 A0A0J9YXV3 536 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 DNAJC9-AS1A6NH13 148 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 ODF3BA8MYP8 253 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 HCFC1P51610 2035 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 ANAPC13Q9BS18 74 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 Q9H8V8 135 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
HDLBP-241ENST00000487169 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms