RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 GRIFINA4D1Z8 144 aa7.04□□□□□ -1.28
HMGN1-215ENST00000485550 H3BVH4 76 aa7.04□□□□□ -1.28
HMGN1-215ENST00000485550 M0R036 132 aa7.04□□□□□ -1.28
HMGN1-215ENST00000485550 PEX7O00628 323 aa7.04□□□□□ -1.28
HMGN1-215ENST00000485550 ASIPP42127 132 aa7.04□□□□□ -1.28
HMGN1-215ENST00000485550 C14orf178Q8N769 122 aaPredicted RBP7.04□□□□□ -1.28
HMGN1-215ENST00000485550 Q8N814 137 aa7.04□□□□□ -1.28
HMGN1-215ENST00000485550 TMSB15BA0A087X1C1 80 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 FAM74A7A6NL05 159 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 A8MWV9 139 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 B4DEV8 164 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 LECT2O14960 151 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 ARMS2P0C7Q2 107 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 CRIP1P50238 77 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 WFDC2Q14508 124 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 AKR1C8PQ5T2L2 129 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
HMGN1-215ENST00000485550 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
HMGN1-215ENST00000485550 FAM30AQ9NZY2 134 aa7.03□□□□□ -1.28
HMGN1-215ENST00000485550 SH2D1AO60880 128 aa7.02□□□□□ -1.29
HMGN1-215ENST00000485550 FAM74A4Q5TZK3 123 aa7.02□□□□□ -1.29
HMGN1-215ENST00000485550 ZFP2Q6ZN57 461 aa7.02□□□□□ -1.29
HMGN1-215ENST00000485550 Q86TA4 180 aa7.02□□□□□ -1.29
HMGN1-215ENST00000485550 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-215ENST00000485550 TMEM70Q9BUB7 260 aa7.02□□□□□ -1.29
HMGN1-215ENST00000485550 IL36BQ9NZH7 164 aa7.02□□□□□ -1.29
HMGN1-215ENST00000485550 A0A087WWL8 130 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 MAP1LC3B2A6NCE7 125 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 KRBOX1C9JBD0 128 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 ARPC5O15511 151 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
HMGN1-215ENST00000485550 UBE2G1P62253 170 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 UFSP1Q6NVU6 142 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 DEFB104AQ8WTQ1 72 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 HIST1H2BAQ96A08 127 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 TM2D2Q9BX73 214 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 MAP1LC3BQ9GZQ8 125 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
HMGN1-215ENST00000485550 IGLV2-33A0A075B6J2 118 aaPredicted RBP7□□□□□ -1.29
HMGN1-215ENST00000485550 G3V3Q6 166 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 SMLR1H3BR10 107 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 M0R381 172 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 LINC00694P0DN24 101 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 FHITP49789 147 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 OR11H4Q8NGC9 324 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 DNAJC30Q96LL9 226 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 CYTL1Q9NRR1 136 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 ZFP30Q9Y2G7 519 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 PHLDA3Q9Y5J5 127 aa7□□□□□ -1.29
HMGN1-215ENST00000485550 TRAV8-3A0A0A6YYJ7 113 aa6.99□□□□□ -1.29
HMGN1-215ENST00000485550 A0A1B0GV50 99 aa6.99□□□□□ -1.29
HMGN1-215ENST00000485550 TPT1P13693 172 aaKnown RBP6.99□□□□□ -1.29
HMGN1-215ENST00000485550 LAGE3Q14657 143 aa6.99□□□□□ -1.29
HMGN1-215ENST00000485550 PIK3CD-AS1Q5SR53 167 aa6.99□□□□□ -1.29
HMGN1-215ENST00000485550 FAM162BQ5T6X4 162 aa6.99□□□□□ -1.29
HMGN1-215ENST00000485550 BAALCQ8WXS3 180 aa6.99□□□□□ -1.29
HMGN1-215ENST00000485550 NKX6-2Q9C056 277 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-215ENST00000485550 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 A0A087WWC5 75 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 PAGE4O60829 102 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 LINC01620Q4KN68 170 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 DNLZQ5SXM8 178 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 STOML3Q8TAV4 291 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 SFRP2Q96HF1 295 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 FMC1Q96HJ9 113 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 KLK12Q9UKR0 248 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 URGCP-MRPS24S4R325 110 aa6.98□□□□□ -1.29
HMGN1-215ENST00000485550 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 RHODO00212 210 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 LTAP01374 205 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 AKR1C3P42330 323 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 SSTP61278 116 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 ZNF674Q2M3X9 581 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 TOR2AQ5JU69 321 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 COX8CQ7Z4L0 72 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 NIT1Q86X76 327 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 UBE2WQ96B02 151 aa6.97□□□□□ -1.29
HMGN1-215ENST00000485550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-215ENST00000485550 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.3
HMGN1-215ENST00000485550 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.3
HMGN1-215ENST00000485550 RPL19P84098 196 aaKnown RBP6.96□□□□□ -1.3
HMGN1-215ENST00000485550 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
HMGN1-215ENST00000485550 ZFP82Q8N141 532 aa6.96□□□□□ -1.3
HMGN1-215ENST00000485550 FAM213BQ8TBF2 198 aa6.96□□□□□ -1.3
HMGN1-215ENST00000485550 SFT2D1Q8WV19 159 aa6.96□□□□□ -1.3
HMGN1-215ENST00000485550 A0A087WX48 190 aa6.95□□□□□ -1.3
HMGN1-215ENST00000485550 TRBV6-1A0A0K0K1D8 114 aa6.95□□□□□ -1.3
HMGN1-215ENST00000485550 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
HMGN1-215ENST00000485550 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
HMGN1-215ENST00000485550 RPL36AP83881 106 aaKnown RBP6.95□□□□□ -1.3
HMGN1-215ENST00000485550 RGS21Q2M5E4 152 aa6.95□□□□□ -1.3
HMGN1-215ENST00000485550 RPL36ALQ969Q0 106 aaKnown RBP6.95□□□□□ -1.3
HMGN1-215ENST00000485550 UBE2D3P61077 147 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 UBE2D2P62837 147 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 KCNIP4Q6PIL6 250 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 BAGE2Q86Y30 109 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 KCNRGQ8N5I3 272 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms