RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SRSF3P84103 164 aaKnown RBP4.27□□□□□ -1.73
USF3-202ENST00000478658 SPRY4Q9C004 299 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 K7EM74 188 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 OVOL3O00110 214 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 FAM27E3Q08E93 113 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 Q8TCH9 128 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 PTPRBP23467 1997 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 NDUFA11Q86Y39 141 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 DKK2Q9UBU2 259 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 C1QL1O75973 258 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 WFDC5Q8TCV5 224 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 ODF3Q96PU9 254 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 TRBV10-3A0A0K0K1G6 114 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 IGHV1-46P01743 117 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 SNRPCP09234 159 aaKnown RBP4.27□□□□□ -1.73
USF3-202ENST00000478658 Q6P435 159 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 AMTNQ6UX39 209 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 PRR13Q9NZ81 148 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 PRO0255Q9UI72 69 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 PLA2G1BP04054 148 aaKnown RBP4.26□□□□□ -1.73
USF3-202ENST00000478658 CRYGDP07320 174 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 SMIM14Q96QK8 99 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 IGKV1D-8A0A087WSZ0 117 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 C12orf74Q32Q52 190 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 NBASA2RRP1 2371 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 CD55P08174 381 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 IGLL1P15814 213 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 MDKP21741 143 aaPredicted RBP4.26□□□□□ -1.73
USF3-202ENST00000478658 IGLV3-21P80748 117 aaPredicted RBP4.26□□□□□ -1.73
USF3-202ENST00000478658 ZNF747Q9BV97 191 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 POLR3KQ9Y2Y1 108 aaPredicted RBP4.26□□□□□ -1.73
USF3-202ENST00000478658 DSCAML1Q8TD84 2053 aa4.26□□□□□ -1.73
USF3-202ENST00000478658 GVINP1Q7Z2Y8 2422 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 H3BRN7 92 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 CSRP3P50461 194 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 SLURP1P55000 103 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 CD300CQ08708 224 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 ZNF843Q8N446 348 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 REG4Q9BYZ8 158 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 SHISA2Q6UWI4 295 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 GGNQ86UU5 652 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 WFDC10BQ8IUB3 73 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 CHCHD2Q9Y6H1 151 aaPredicted RBP4.25□□□□□ -1.73
USF3-202ENST00000478658 S4R3C0 116 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 TRAV10A0A0B4J240 114 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 MIFP14174 115 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 REG3GQ6UW15 175 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 TMEM14EPQ6UXP3 125 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 MALRD1Q5VYJ5 2156 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 IGKV1-9A0A0C4DH69 117 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 IGKV1-6A0A0C4DH72 117 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 TRBV30A0A0K0K1B3 111 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 IBA57-AS1B1ANH7 110 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
USF3-202ENST00000478658 NTN5Q8WTR8 489 aaPredicted RBP4.25□□□□□ -1.73
USF3-202ENST00000478658 PRR25Q96S07 402 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 MRPL35Q9NZE8 188 aaKnown RBP4.25□□□□□ -1.73
USF3-202ENST00000478658 USF3Q68DE3 2245 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 TECTAO75443 2155 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 SIP14410 1827 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 CACNA1GO43497 2377 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 IGHV1-18A0A0C4DH31 117 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 C19orf71A6NCJ1 209 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 K7EMT4 169 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 IGHV4-59P01825 116 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 QRFPP83859 136 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 LY6DQ14210 128 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 CDCP2Q5VXM1 449 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 IL25Q9H293 177 aa4.25□□□□□ -1.73
USF3-202ENST00000478658 ZNF73O43830 326 aaPredicted RBP4.24□□□□□ -1.73
USF3-202ENST00000478658 DAND5Q8N907 189 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 IGHV3-30P01768 117 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 IGHV3-30-5P0DP03 117 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 SPAG11AQ6PDA7 123 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 ZNF702PQ9H963 129 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 KIF26AQ9ULI4 1882 aaPredicted RBP4.24□□□□□ -1.73
USF3-202ENST00000478658 WI2-2373I1.2A0A1W2PRP0 233 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 NDPQ00604 133 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 A0A1B0GW54 56 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 TMEM223A0PJW6 202 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 A6NDX4 124 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 H2BFSP57053 126 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 CFAP126Q5VTH2 177 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 VOPP1Q96AW1 172 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 MDFICQ9P1T7 246 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 E7EUB6 86 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 PRB4P10163 310 aaPredicted RBP4.24□□□□□ -1.73
USF3-202ENST00000478658 PLA2G2AP14555 144 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 Q6ZQT7 251 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 ZNF833PQ6ZTB9 187 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 LRRC75A-AS1Q8N1F1 130 aa4.24□□□□□ -1.73
USF3-202ENST00000478658 CXCL1P09341 107 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms