RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 MED28Q9H204 178 aa8.05□□□□□ -1.12
TRAF4-209ENST00000473421 A0A087WX48 190 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 A0A1W2PPV4 95 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
TRAF4-209ENST00000473421 SUMO1P63165 101 aaKnown RBP8.04□□□□□ -1.12
TRAF4-209ENST00000473421 MPV17L2Q567V2 206 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 C15orf54Q8N8G6 183 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 OR10G9Q8NGN4 311 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 OR10G7Q8NGN6 311 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 SUN5Q8TC36 379 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
TRAF4-209ENST00000473421 MPC2O95563 127 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
TRAF4-209ENST00000473421 GCHFRP30047 84 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 RPL12P30050 165 aaKnown RBP8.03□□□□□ -1.12
TRAF4-209ENST00000473421 UBE2D3P61077 147 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 UBE2D2P62837 147 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 PIK3CD-AS1Q5SR53 167 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 Q6ZRU5 148 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 C1orf43Q9BWL3 253 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 IL36BQ9NZH7 164 aa8.03□□□□□ -1.12
TRAF4-209ENST00000473421 LINC00862A6NCI5 91 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 M0R036 132 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 IFNA7P01567 189 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 CHTF8P0CG12 524 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 STAG3L2P0CL84 134 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 STAG3L3P0CL85 134 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 CLPSL2Q6UWE3 100 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 C9orf62Q8N4C0 152 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 RAB24Q969Q5 203 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 SH3BGRL3Q9H299 93 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 ARL2-SNX15V9GYD0 113 aa8.02□□□□□ -1.13
TRAF4-209ENST00000473421 SERTM2A0A1B0GWG4 89 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 KRBOX1C9JBD0 128 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 SLPIP03973 132 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 Q0VG73 95 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 SFRP2Q96HF1 295 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 CHCHD7Q9BUK0 85 aa8.01□□□□□ -1.13
TRAF4-209ENST00000473421 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 B4DEV8 164 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 ANGP03950 147 aaKnown RBP8□□□□□ -1.13
TRAF4-209ENST00000473421 CDC34P49427 236 aaPredicted RBP8□□□□□ -1.13
TRAF4-209ENST00000473421 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
TRAF4-209ENST00000473421 ELOBQ15370 118 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 Q5BKY6 102 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 NTM-AS1Q6ZSK4 140 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 ZC2HC1AQ96GY0 325 aa8□□□□□ -1.13
TRAF4-209ENST00000473421 TMSB15BA0A087X1C1 80 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 FABP5P3A8MUU1 101 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 M0R381 172 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 RHODO00212 210 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 SEC11BP0C7V7 166 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 RAB14P61106 215 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 CYCSP99999 105 aaKnown RBP7.99□□□□□ -1.13
TRAF4-209ENST00000473421 CLLU1Q5K131 121 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 DNLZQ5SXM8 178 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 TEX261Q6UWH6 196 aa7.99□□□□□ -1.13
TRAF4-209ENST00000473421 TRBV7-3A0A075B6L6 115 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 K7EQM0 130 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 SH2D1AO60880 128 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 SAPCD1Q5SSQ6 148 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 HSD17B11Q8NBQ5 300 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 NEXN-AS1Q8NBZ9 246 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 OR11H4Q8NGC9 324 aa7.98□□□□□ -1.13
TRAF4-209ENST00000473421 LPAP08519 4548 aa7.97□□□□□ -1.13
TRAF4-209ENST00000473421 A0A087WYN8 130 aa7.97□□□□□ -1.13
TRAF4-209ENST00000473421 CRPP02741 224 aa7.97□□□□□ -1.13
TRAF4-209ENST00000473421 RPL36AP83881 106 aaKnown RBP7.97□□□□□ -1.13
TRAF4-209ENST00000473421 Q86TA4 180 aa7.97□□□□□ -1.13
TRAF4-209ENST00000473421 RPL36ALQ969Q0 106 aaKnown RBP7.97□□□□□ -1.13
TRAF4-209ENST00000473421 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
TRAF4-209ENST00000473421 MED9Q9NWA0 146 aa7.97□□□□□ -1.13
TRAF4-209ENST00000473421 A0A0D9SG52 128 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 TRBV10-1A0A0K0K1A3 114 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 PHOX2AO14813 284 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 GIPP09681 153 aaPredicted RBP7.96□□□□□ -1.14
TRAF4-209ENST00000473421 ATP6V0CP27449 155 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 UBE2G2P60604 165 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 RBX1P62877 108 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 ZNF726P1Q15940 193 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 KCNIP4Q6PIL6 250 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 LINC00269Q8N2A0 174 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.14
TRAF4-209ENST00000473421 IGLV10-54A0A075B6I4 117 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 MUC21A0A0G2JKD1 596 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 SSNA1O43805 119 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 GAGE6Q13070 117 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 MIAQ16674 131 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 PRR27Q6MZM9 219 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 LINC01600Q96MT4 127 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 CHCHD5Q9BSY4 110 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
TRAF4-209ENST00000473421 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms