RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 C9JQL5 133 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 TMEM250H0YL14 139 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 SPINK4O60575 86 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 SRP19P09132 144 aaKnown RBP4.71□□□□□ -1.66
SCN9A-206ENST00000472119 RAB14P61106 215 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 RPL19P84098 196 aaKnown RBP4.71□□□□□ -1.66
SCN9A-206ENST00000472119 OR5I1Q13606 314 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 LINC00612Q8N6U2 182 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 OCC1Q8TAD7 63 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 SPXQ9BT56 116 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 PARLQ9H300 379 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 KLK5Q9Y337 293 aaPredicted RBP4.71□□□□□ -1.66
SCN9A-206ENST00000472119 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 TENM2Q9NT68 2774 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 C9JCJ5 164 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 F5H768 121 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 H3BVH4 76 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 IGHV3-53P01767 116 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 ATP5G1P05496 136 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 RNASE3P12724 160 aaKnown RBP4.7□□□□□ -1.66
SCN9A-206ENST00000472119 S100A4P26447 101 aaKnown RBP4.7□□□□□ -1.66
SCN9A-206ENST00000472119 LGALS9BQ3B8N2 356 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 C9orf85Q96MD7 179 aa4.7□□□□□ -1.66
SCN9A-206ENST00000472119 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
SCN9A-206ENST00000472119 IGHV4-4A0A075B6R2 117 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 ZNF727A8MUV8 499 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 K7EN84 100 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 M0R2P5 195 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 SFTA3P0C7M3 94 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 ARMS2P0C7Q2 107 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 ASIPP42127 132 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 PEA15Q15121 130 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 ZNF876PQ49A33 203 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 CLLU1Q5K131 121 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 TMEM88Q6PEY1 159 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 RASL10AQ92737 203 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 SMIM7Q9BQ49 75 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 APLNQ9ULZ1 77 aa4.69□□□□□ -1.66
SCN9A-206ENST00000472119 TRAV26-1A0A087WT03 109 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 MUC21A0A0G2JKD1 596 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 A0A0J9YY99 117 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 MUC21A0A140T8X8 626 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 C19orf71A6NCJ1 209 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 NDUFS6O75380 124 aaKnown RBP4.68□□□□□ -1.66
SCN9A-206ENST00000472119 P01737 135 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 GZMBP10144 247 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 SSTP61278 116 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 POM121L12Q8N7R1 296 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 OR2D3Q8NGH3 330 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 SMIM12Q96EX1 92 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 C18orf15Q96N68 181 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 RNASE7Q9H1E1 156 aaKnown RBP4.68□□□□□ -1.66
SCN9A-206ENST00000472119 IL36BQ9NZH7 164 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 STARD9Q9P2P6 4700 aa4.68□□□□□ -1.66
SCN9A-206ENST00000472119 TMEM241Q24JQ0 296 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 DNLZQ5SXM8 178 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 LINC01551Q86U37 167 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 OR4C5Q8NGB2 326 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 NDUFAF3Q9BU61 184 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 SMDT1Q9H4I9 107 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 JPT2Q9H910 190 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 SCRT2Q9NQ03 307 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 BIN3Q9NQY0 253 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 PHLDA3Q9Y5J5 127 aa4.67□□□□□ -1.66
SCN9A-206ENST00000472119 MUC4Q99102 2169 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 IGHV3-73A0A0B4J1V6 119 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 TRAV4A0A0B4J268 109 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 TRGV4A0A0C4DH28 118 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 M0R381 172 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 RS1O15537 224 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 PRSS2P07478 247 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 FAM74A3Q4VXF1 159 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 SOHLH1Q5JUK2 328 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 CFAP126Q5VTH2 177 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 OR10AG1Q8NH19 301 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 PTH2Q96A98 100 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 VSIG2Q96IQ7 327 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 FAM210BQ96KR6 192 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 TPPP3Q9BW30 176 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 SAMD10Q9BYL1 202 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 RPP21Q9H633 154 aaKnown RBP4.66□□□□□ -1.66
SCN9A-206ENST00000472119 HHLA3Q9XRX5 114 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 LY96Q9Y6Y9 160 aa4.66□□□□□ -1.66
SCN9A-206ENST00000472119 SNAI2O43623 268 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 GATCO43716 136 aaKnown RBP4.65□□□□□ -1.67
SCN9A-206ENST00000472119 LY6G6CO95867 125 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 CXCL1P09341 107 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 OR5AL1P0C617 328 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 CRYBA4P53673 196 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 TCTAP57738 103 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 RPS20P60866 119 aaKnown RBP4.65□□□□□ -1.67
SCN9A-206ENST00000472119 RPL23P62829 140 aaKnown RBP4.65□□□□□ -1.67
SCN9A-206ENST00000472119 ADIRFQ15847 76 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 LYZL1Q6UWQ5 148 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 ZFP82Q8N141 532 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 FER1L6-AS1Q8NA97 138 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 NAT8Q9UHE5 227 aa4.65□□□□□ -1.67
SCN9A-206ENST00000472119 PLECQ15149 4684 aaKnown RBP4.65□□□□□ -1.67
SCN9A-206ENST00000472119 DNAH1Q9P2D7 4330 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms