RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 POM121L12Q8N7R1 296 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 RNASE6Q93091 150 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 TMEM101Q96IK0 257 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 LENEPQ9Y5L5 61 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 WNK2Q9Y3S1 2297 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 IGHV3-66A0A0C4DH42 116 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 CACNA1HO95180 2353 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 CLPSL1A2RUU4 121 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 S100A4P26447 101 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 HES1Q14469 280 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 CELSR2Q9HCU4 2923 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 IGHV4OR15-8A0A075B7B6 117 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 A0A087WW49 117 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 A0A0J9YX75 114 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 BSPH1Q075Z2 132 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 DPM3Q9P2X0 92 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 POLR2KP53803 58 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 LINC00694P0DN24 101 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 DUX3Q96PT4 197 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 ICOSQ9Y6W8 199 aa6.04□□□□□ -1.44
HMGXB4-202ENST00000418170 TPRP12270 2363 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 TRGV11A0A075B6L2 103 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 TRAV21A0A0B4J279 112 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 IGF1P05019 195 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 METTL26Q96S19 204 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 DYNLRB1Q9NP97 96 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 IGHV3OR16-13A0A075B7E8 117 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 IGHV3-74A0A0B4J1X5 117 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 NDUFA7O95182 113 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 CD3EP07766 207 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 C5orf47Q569G3 176 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 SPANXDQ9BXN6 97 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 NBPF19A0A087WUL8 3843 aa6.03□□□□□ -1.44
HMGXB4-202ENST00000418170 MUC4Q99102 2169 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 VCYO14598 125 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 LINC00315P59091 139 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 C9orf153Q5TBE3 101 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 RP1L1Q8IWN7 2480 aaPredicted RBP6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 C15orf32Q32M92 178 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 C3orf22Q8N5N4 141 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 J3KRW8 73 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 NXPH4O95158 308 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 COX6CP09669 75 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 UBE2E1P51965 193 aa6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 ZNF469Q96JG9 3925 aaPredicted RBP6.02□□□□□ -1.45
HMGXB4-202ENST00000418170 A0A0G2JNJ9 132 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 LST1O00453 97 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 IGHV1-69P01742 117 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 RNASE3P12724 160 aaKnown RBP6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 DEFB104AQ8WTQ1 72 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 Q9UFV3 132 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 POLEQ07864 2286 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 UQCRQO14949 82 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 ATP5J2P56134 94 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 LINC00477Q96M19 166 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 LITAFQ99732 161 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 IGHV3-49A0A0A0MS15 119 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 TRBV27A0A0K0K1C4 114 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 OOSP1A8MZH6 123 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 ACYP1P07311 99 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 IGHV3-64A0A075B6Q5 118 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 NPFFO15130 113 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 CEMP1Q6PRD7 247 aaPredicted RBP6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 LRRC75A-AS1Q8N1F1 130 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 ITLN2Q8WWU7 325 aaPredicted RBP6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 C16orf92Q96LL3 132 aa6.01□□□□□ -1.45
HMGXB4-202ENST00000418170 SUMO4Q6EEV6 95 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 Q8N6K4 173 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 CLEC2BQ92478 149 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 LINC00526Q96FQ7 95 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 U3KQE9 123 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 PIEZO2Q9H5I5 2752 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 IGHV7-81A0A0B4J1V7 117 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 LOC107984640A0A0U1RRK4 108 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 A0A1B0GX51 115 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 HERVK_113P63121 156 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 C9orf139Q6ZV77 190 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 LY6G5BQ8NDX9 201 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 C20orf173Q96LM9 149 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 J3KT08 172 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 GNRH2O43555 120 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 CCDC140Q96MF4 163 aa6□□□□□ -1.45
HMGXB4-202ENST00000418170 ATP5G1P05496 136 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 KLK9Q2XQG4 91 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 FAM110DQ8TAY7 271 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 KLK9Q9UKQ9 250 aa5.99□□□□□ -1.45
HMGXB4-202ENST00000418170 CEP250Q9BV73 2442 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms