RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 M0R381 172 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 ORMDL2Q53FV1 153 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 C9orf47Q6ZRZ4 202 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 Q8N1Y9 231 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 RASL10AQ92737 203 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 A0A0J9YY99 117 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 C20orf173Q96LM9 149 aa12.1□□□□□ -0.47
CHMP1A-201ENST00000397901 DEFB1P60022 68 aa12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 C15orf53Q8NAA6 179 aa12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 ODF3Q96PU9 254 aa12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 SMIM2Q9BVW6 85 aa12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 UBE2E1P51965 193 aa12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 TMEM219Q86XT9 240 aa12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 NTN5Q8WTR8 489 aaPredicted RBP12.09□□□□□ -0.47
CHMP1A-201ENST00000397901 IGHV4-4A0A075B6R2 117 aa12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-201ENST00000397901 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-201ENST00000397901 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
CHMP1A-201ENST00000397901 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-201ENST00000397901 ITLN2Q8WWU7 325 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-201ENST00000397901 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
CHMP1A-201ENST00000397901 U3KQE9 123 aa12.06□□□□□ -0.48
CHMP1A-201ENST00000397901 HERVK_113P61574 105 aa12.06□□□□□ -0.48
CHMP1A-201ENST00000397901 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-201ENST00000397901 C14orf178Q8N769 122 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-201ENST00000397901 IGHV3OR16-10A0A075B7F0 116 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 MGPP08493 103 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 S100A4P26447 101 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 ID1P41134 155 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 KLK9Q9UKQ9 250 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 P0DMU3 169 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 FAM231AP0DMU4 169 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 FAM231CP0DMU5 169 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 SUMO2P61956 95 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
CHMP1A-201ENST00000397901 TRAV2A0A0B4J234 112 aa12.04□□□□□ -0.48
CHMP1A-201ENST00000397901 C5orf56Q8N8D9 126 aa12.04□□□□□ -0.48
CHMP1A-201ENST00000397901 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
CHMP1A-201ENST00000397901 UNQ9165/PRO28630Q6UXU0 137 aa12.04□□□□□ -0.48
CHMP1A-201ENST00000397901 NPFFO15130 113 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 C9orf139Q6ZV77 190 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 IGKV3-7A0A075B6H7 116 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 ATXN8Q156A1 80 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 PAPPA-AS1Q5QFB9 102 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 C2orf66Q6UXQ4 117 aa12.03□□□□□ -0.48
CHMP1A-201ENST00000397901 TRAV41A0A0B4J266 112 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 C19orf84I3L1E1 186 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 IGHV3-33P01772 117 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 GNLYP22749 145 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 LINC01620Q4KN68 170 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 Q6ZS46 218 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.48
CHMP1A-201ENST00000397901 F6UB75 175 aa12.02□□□□□ -0.49
CHMP1A-201ENST00000397901 GPHB5Q86YW7 130 aa12.02□□□□□ -0.49
CHMP1A-201ENST00000397901 LINC01587Q99440 93 aa12.02□□□□□ -0.49
CHMP1A-201ENST00000397901 BPESC1Q9GZL8 116 aa12.02□□□□□ -0.49
CHMP1A-201ENST00000397901 DPH3P1Q9H4G8 78 aa12.02□□□□□ -0.49
CHMP1A-201ENST00000397901 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
CHMP1A-201ENST00000397901 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 TEX49A0A1B0GTD5 131 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 LGALS9O00182 355 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 RNASE4P34096 147 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 NRGNQ92686 78 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 PKD1L2Q7Z442 2459 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 H3BMM0 161 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
CHMP1A-201ENST00000397901 GNRH2O43555 120 aa12□□□□□ -0.49
CHMP1A-201ENST00000397901 LINC00477Q96M19 166 aa12□□□□□ -0.49
CHMP1A-201ENST00000397901 CACNA1AO00555 2505 aa12□□□□□ -0.49
CHMP1A-201ENST00000397901 TRBV10-2A0A0K0K1G8 114 aa12□□□□□ -0.49
CHMP1A-201ENST00000397901 RNF223E7ERA6 249 aa12□□□□□ -0.49
CHMP1A-201ENST00000397901 LENEPQ9Y5L5 61 aa12□□□□□ -0.49
CHMP1A-201ENST00000397901 C11orf86A6NJI1 115 aa11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 DUSP14O95147 198 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 LMO4P61968 165 aa11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 A0A0B4J2C4 111 aa11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 IGHV3-11P01762 117 aa11.99□□□□□ -0.49
CHMP1A-201ENST00000397901 SPTAN1Q13813 2472 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 A4D1N5 150 aa11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 MOB4Q9Y3A3 225 aa11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 IGLV4-69A0A075B6H9 119 aa11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 CRYGDP07320 174 aa11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 DNAJC30Q96LL9 226 aa11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 CFAP46Q8IYW2 2715 aa11.98□□□□□ -0.49
CHMP1A-201ENST00000397901 VPS13CQ709C8 3753 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms