RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PRR9Q5T870 116 aa14.37□□□□□ -0.11
SMARCD1-201ENST00000381513 MED13LQ71F56 2210 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 LRRC75A-AS1Q8N1F1 130 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 ZNF580Q9UK33 172 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 IGHV1-69DA0A0B4J2H0 117 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 POM121L12Q8N7R1 296 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 DUX5Q96PT3 197 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 ZNF576Q9H609 170 aa14.36□□□□□ -0.11
SMARCD1-201ENST00000381513 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
SMARCD1-201ENST00000381513 MGAQ8IWI9 3026 aa14.35□□□□□ -0.11
SMARCD1-201ENST00000381513 RNF223E7ERA6 249 aa14.35□□□□□ -0.11
SMARCD1-201ENST00000381513 LEPROTO15243 131 aa14.35□□□□□ -0.11
SMARCD1-201ENST00000381513 LINC00526Q96FQ7 95 aa14.35□□□□□ -0.11
SMARCD1-201ENST00000381513 PPP1R17O96001 155 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 TMEM141Q96I45 108 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 TNRC18O15417 2968 aaPredicted RBP14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 TRAV25A0A0B4J276 109 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 BUB3O43684 328 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 ZNF876PQ49A33 203 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 SEM1Q6ZVN7 128 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 C16orf92Q96LL3 132 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 TMEM223A0PJW6 202 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 LY6DQ14210 128 aa14.34□□□□□ -0.11
SMARCD1-201ENST00000381513 GNRH2O43555 120 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 NDPQ00604 133 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 FDCSPQ8NFU4 85 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 BOD1L1Q8NFC6 3051 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 TRAV17A0A0B4J275 112 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 A0A0J9YXY3 114 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 hADV29S1A0JD25 119 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 GPHB5Q86YW7 130 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 A0A087WWL8 130 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 RNF5Q99942 180 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 IMUPQ9GZP8 106 aa14.32□□□□□ -0.12
SMARCD1-201ENST00000381513 A0A0G2JNJ9 132 aa14.31□□□□□ -0.12
SMARCD1-201ENST00000381513 SDHAF1A6NFY7 115 aa14.31□□□□□ -0.12
SMARCD1-201ENST00000381513 DEFB1P60022 68 aa14.31□□□□□ -0.12
SMARCD1-201ENST00000381513 FAM74A4Q5TZK3 123 aa14.31□□□□□ -0.12
SMARCD1-201ENST00000381513 Q9UFV3 132 aa14.31□□□□□ -0.12
SMARCD1-201ENST00000381513 A0A0J9YXV3 536 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 VCYO14598 125 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 ZNF883P0CG24 379 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 TIMM17AQ99595 171 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 JPT2Q9H910 190 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 SPTBN1Q01082 2364 aaKnown RBP14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 LYNX1G3V0Z9 82 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 LYNX1P0DP58 116 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 I3L3M4 83 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 RS1O15537 224 aa14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 RNASE4P34096 147 aaKnown RBP14.3□□□□□ -0.12
SMARCD1-201ENST00000381513 TRAV21A0A0B4J279 112 aa14.29□□□□□ -0.12
SMARCD1-201ENST00000381513 LST1O00453 97 aa14.29□□□□□ -0.12
SMARCD1-201ENST00000381513 KLRB1Q12918 225 aa14.29□□□□□ -0.12
SMARCD1-201ENST00000381513 C15orf32Q32M92 178 aa14.29□□□□□ -0.12
SMARCD1-201ENST00000381513 COX7CP15954 63 aa14.28□□□□□ -0.12
SMARCD1-201ENST00000381513 LINC00643Q86TS7 51 aa14.28□□□□□ -0.12
SMARCD1-201ENST00000381513 TMEM219Q86XT9 240 aa14.28□□□□□ -0.12
SMARCD1-201ENST00000381513 SMCR5Q8TEV8 140 aa14.28□□□□□ -0.12
SMARCD1-201ENST00000381513 ECSCRQ19T08 205 aa14.28□□□□□ -0.12
SMARCD1-201ENST00000381513 CLEC19AQ6UXS0 136 aa14.28□□□□□ -0.12
SMARCD1-201ENST00000381513 A0A1B0GX51 115 aa14.27□□□□□ -0.12
SMARCD1-201ENST00000381513 C9orf47Q6ZRZ4 202 aa14.27□□□□□ -0.12
SMARCD1-201ENST00000381513 MUC3AQ02505 3323 aa14.27□□□□□ -0.13
SMARCD1-201ENST00000381513 ACYP1P07311 99 aa14.27□□□□□ -0.13
SMARCD1-201ENST00000381513 LINC01600Q96MT4 127 aa14.27□□□□□ -0.13
SMARCD1-201ENST00000381513 RHOHQ15669 191 aa14.26□□□□□ -0.13
SMARCD1-201ENST00000381513 IGKV3-7A0A075B6H7 116 aa14.26□□□□□ -0.13
SMARCD1-201ENST00000381513 DPM3Q9P2X0 92 aa14.26□□□□□ -0.13
SMARCD1-201ENST00000381513 TRACP01848 142 aa14.26□□□□□ -0.13
SMARCD1-201ENST00000381513 SUMO4Q6EEV6 95 aa14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 MBD3L4A6NDZ8 208 aaPredicted RBP14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 MBD3L3A6NE82 208 aaPredicted RBP14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 MBD3L5A6NJ08 208 aaPredicted RBP14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 BSPH1Q075Z2 132 aa14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 ADAMTSL4-AS1Q5T5F5 129 aa14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 MBD3L2Q8NHZ7 208 aaPredicted RBP14.25□□□□□ -0.13
SMARCD1-201ENST00000381513 IGHV3-30-3P0DP02 117 aa14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 TIMM21Q9BVV7 248 aa14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 KAAG1Q9UBP8 84 aa14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 GVINP1Q7Z2Y8 2422 aa14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 POLR2KP53803 58 aaKnown RBP14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 RPL11P62913 178 aaKnown RBP14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 DAND5Q8N907 189 aa14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 KIR2DL5BQ8NHK3 375 aa14.24□□□□□ -0.13
SMARCD1-201ENST00000381513 DEFB121Q5J5C9 76 aa14.23□□□□□ -0.13
SMARCD1-201ENST00000381513 PRRC2AP48634 2157 aaKnown RBP14.23□□□□□ -0.13
SMARCD1-201ENST00000381513 NACAE9PAV3 2078 aa14.23□□□□□ -0.13
SMARCD1-201ENST00000381513 NUP37Q8NFH4 326 aa14.23□□□□□ -0.13
SMARCD1-201ENST00000381513 F5H768 121 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 NDUFA12Q9UI09 145 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 RNASE6Q93091 150 aaKnown RBP14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 ZFAND3Q9H8U3 227 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 ADGRG4Q8IZF6 3080 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 DSCR8Q96T75 97 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 APC2O95996 2303 aa14.22□□□□□ -0.13
SMARCD1-201ENST00000381513 CLPSL1A2RUU4 121 aa14.21□□□□□ -0.13
SMARCD1-201ENST00000381513 NSUN5P1Q3KNT7 163 aa14.21□□□□□ -0.13
SMARCD1-201ENST00000381513 HRCT1Q6UXD1 115 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms