RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 ERG28Q9UKR5 140 aa7.04□□□□□ -1.28
TOP1-201ENST00000361337 H3BRN7 92 aa7.04□□□□□ -1.28
TOP1-201ENST00000361337 EGR2P11161 476 aaPredicted RBP7.04□□□□□ -1.28
TOP1-201ENST00000361337 U3KQK5 164 aa7.04□□□□□ -1.28
TOP1-201ENST00000361337 TEX15Q9BXT5 2789 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 CHCHD5Q9BSY4 110 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 BLCAPP62952 87 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 RNF125Q96EQ8 232 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 ADARB2-AS1A8MUL3 147 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 TCTEX1D4Q5JR98 221 aa7.03□□□□□ -1.28
TOP1-201ENST00000361337 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
TOP1-201ENST00000361337 IGLV1-47P01700 117 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 ZNF562Q6V9R5 426 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 DYNAPQ8N1N2 210 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 OR11H6Q8NGC7 330 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 PHLDA3Q9Y5J5 127 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 IGHV4-59P01825 116 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
TOP1-201ENST00000361337 DTX2Q86UW9 622 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 KAAG1Q9UBP8 84 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 NDPQ00604 133 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 C5orf64Q2M2E5 130 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
TOP1-201ENST00000361337 TRBV6-1A0A0K0K1D8 114 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 LMO4P61968 165 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 C8orf31Q8N9H6 132 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 DUX3Q96PT4 197 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 HHLA3Q9XRX5 114 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 C10orf105Q8TEF2 133 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 RNF185Q96GF1 192 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 NXT2Q9NPJ8 142 aaKnown RBP7.01□□□□□ -1.29
TOP1-201ENST00000361337 TRAV4A0A0B4J268 109 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 ERCC8Q13216 396 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 DEFB113Q30KQ7 82 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 C15orf32Q32M92 178 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 SMR3AQ99954 134 aa7.01□□□□□ -1.29
TOP1-201ENST00000361337 CENPVL3A0A0U1RRI6 287 aa7□□□□□ -1.29
TOP1-201ENST00000361337 ATP6V0E1O15342 81 aa7□□□□□ -1.29
TOP1-201ENST00000361337 DEFB112Q30KQ8 113 aa7□□□□□ -1.29
TOP1-201ENST00000361337 C21orf62Q9NYP8 219 aa7□□□□□ -1.29
TOP1-201ENST00000361337 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
TOP1-201ENST00000361337 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
TOP1-201ENST00000361337 LINC01548A6NM66 108 aa7□□□□□ -1.29
TOP1-201ENST00000361337 NDUFV3P56181 108 aaKnown RBP7□□□□□ -1.29
TOP1-201ENST00000361337 ODF1Q14990 250 aa7□□□□□ -1.29
TOP1-201ENST00000361337 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
TOP1-201ENST00000361337 FABP5P3A8MUU1 101 aa7□□□□□ -1.29
TOP1-201ENST00000361337 F8W735 103 aaPredicted RBP7□□□□□ -1.29
TOP1-201ENST00000361337 IGHG4P01861 327 aa7□□□□□ -1.29
TOP1-201ENST00000361337 MFAP4P55083 255 aa7□□□□□ -1.29
TOP1-201ENST00000361337 LAGE3Q14657 143 aa7□□□□□ -1.29
TOP1-201ENST00000361337 TEN1Q86WV5 123 aa7□□□□□ -1.29
TOP1-201ENST00000361337 PRR25Q96S07 402 aa7□□□□□ -1.29
TOP1-201ENST00000361337 BAHCC1Q9P281 2608 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 IGHV1-69P01742 117 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 HIST1H4AP62805 103 aaKnown RBP6.99□□□□□ -1.29
TOP1-201ENST00000361337 Q6AWC8 147 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 DGAT2L7PQ6IED9 249 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 Q6ZQT7 251 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 MAPKAPK5-AS1Q8N8E1 139 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 UBR5O95071 2799 aaPredicted RBP6.99□□□□□ -1.29
TOP1-201ENST00000361337 M0R1W7 72 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 UBE2E1P51965 193 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 C11orf71Q6IPW1 123 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 PHLDA1Q8WV24 401 aaPredicted RBP6.99□□□□□ -1.29
TOP1-201ENST00000361337 VCX2Q9H322 139 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 CELSR1Q9NYQ6 3014 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 MYMXA0A1B0GTQ4 84 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 SMAD5-AS1Q9Y6J3 95 aa6.99□□□□□ -1.29
TOP1-201ENST00000361337 TRAV41A0A0B4J266 112 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 PRAC2D3DTV9 90 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 SRSF1Q07955 248 aaKnown RBP eCLIP6.98□□□□□ -1.291e-6■■■■□ 20.8
TOP1-201ENST00000361337 C14orf178Q8N769 122 aaPredicted RBP6.98□□□□□ -1.29
TOP1-201ENST00000361337 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 IGKV3OR2-268A0A0C4DH90 116 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 FANCD2OSQ96PS1 177 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 H3BMM0 161 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 IGLC6P0CF74 106 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 PLA2G2AP14555 144 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 LYPD1Q8N2G4 141 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 UBE2WQ96B02 151 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 CUBNO60494 3623 aa6.98□□□□□ -1.29
TOP1-201ENST00000361337 H7C1H1 209 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 AVPP01185 164 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 RNF182Q8N6D2 247 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 STAB1Q9NY15 2570 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 LOC107984640A0A0U1RRK4 108 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 E9PLD3 99 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 CITED2Q99967 270 aaPredicted RBP6.97□□□□□ -1.29
TOP1-201ENST00000361337 ZMAT4Q9H898 229 aa6.97□□□□□ -1.29
TOP1-201ENST00000361337 LY6LH3BQJ8 138 aa6.96□□□□□ -1.29
TOP1-201ENST00000361337 TCL1BO95988 128 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms