RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 C10orf105Q8TEF2 133 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 WDR86Q86TI4 376 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 IGLV10-54A0A075B6I4 117 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 COA6Q5JTJ3 125 aaKnown RBP7.31□□□□□ -1.24
VPS13A-203ENST00000360280 FOXL2NBQ6ZUU3 175 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 EPOPA6NHQ4 379 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 GYPEP15421 78 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 E9PLD3 99 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 TOMM6Q96B49 74 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 IGHV4OR15-8A0A075B7B6 117 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 A0A087WW49 117 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 CCL18P55774 89 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 ELANEP08246 267 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 KIR2DL5BQ8NHK3 375 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 LYPD6BQ8NI32 183 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 ZNF581Q9P0T4 197 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 LTBP1Q14766 1721 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 WFDC2Q14508 124 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
VPS13A-203ENST00000360280 GNRH2O43555 120 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 GNLYP22749 145 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 WISP1O95388 367 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 FXYD2P54710 66 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 C17orf58Q2M2W7 97 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 BPY2O14599 106 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 COL4A1P02462 1669 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 ZNF491Q8N8L2 437 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 CPAMD8Q8IZJ3 1885 aa7.29□□□□□ -1.24
VPS13A-203ENST00000360280 RNASE8Q8TDE3 154 aaKnown RBP7.29□□□□□ -1.24
VPS13A-203ENST00000360280 A6NED7 52 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 NCR3O14931 201 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 CREBBPQ92793 2442 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 DAND5Q8N907 189 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 ZNRD1Q9P1U0 126 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 MED13LQ71F56 2210 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 A0A0J9YY99 117 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 LYRM9A8MSI8 78 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 LRP4O75096 1905 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 C5orf24Q7Z6I8 188 aa7.28□□□□□ -1.24
VPS13A-203ENST00000360280 LY6HO94772 140 aa7.27□□□□□ -1.24
VPS13A-203ENST00000360280 VPREB3Q9UKI3 123 aa7.27□□□□□ -1.24
VPS13A-203ENST00000360280 B3GALT5-AS1P59052 145 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 E7EQL1 145 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 SPART-AS1P0CW21 52 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 C16orf54Q6UWD8 224 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 NDUFA11Q86Y39 141 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 RNF144BQ7Z419 303 aa7.27□□□□□ -1.25
VPS13A-203ENST00000360280 PRR30Q53SZ7 412 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-203ENST00000360280 PTPRBP23467 1997 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 CCL24O00175 119 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 C20orf197Q8N268 126 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 COX7BP24311 80 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 PRR20EP86478 221 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 PRR20CP86479 221 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 PRR20DP86480 221 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 PRR20BP86481 221 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 PRR20AP86496 221 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 ASPHD1Q5U4P2 390 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 C9orf66Q5T8R8 295 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 TPSG1Q9NRR2 321 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 PCNX3Q9H6A9 2034 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 HOXB4P17483 251 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-203ENST00000360280 Q0VFX4 171 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 AGPAT4-IT1Q9H0P7 198 aa7.26□□□□□ -1.25
VPS13A-203ENST00000360280 MUC4Q99102 2169 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 SDIM1Q6ZPB5 146 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 MIAQ16674 131 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 A0A0J9YXV3 536 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 RIF1Q5UIP0 2472 aaKnown RBP7.25□□□□□ -1.25
VPS13A-203ENST00000360280 C15orf65H3BRN8 121 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 Q96MF0 132 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 SPAG11BQ08648 103 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 SORL1Q92673 2214 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 ODF1Q14990 250 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 TCL1BO95988 128 aa7.25□□□□□ -1.25
VPS13A-203ENST00000360280 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 MIR7-3HGQ8N6C7 128 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 NOTCH4Q99466 2003 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 LOXP28300 417 aaPredicted RBP7.24□□□□□ -1.25
VPS13A-203ENST00000360280 CDPF1Q6NVV7 123 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
VPS13A-203ENST00000360280 HIST2H2BDQ6DRA6 164 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 C17orf77Q96MU5 243 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 TDRG1Q3Y452 100 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 CTRLP40313 264 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 KAAG1Q9UBP8 84 aa7.24□□□□□ -1.25
VPS13A-203ENST00000360280 Q6ZS92 163 aa7.23□□□□□ -1.25
VPS13A-203ENST00000360280 C14orf177Q52M58 125 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms