RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 SMIM13P0DJ93 91 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 CDKN1BP46527 198 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 BBC3Q96PG8 261 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-201ENST00000334859 CYSLTR1Q9Y271 337 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 OR11H12B2RN74 326 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 K7ERJ3 54 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 DUSP14O95147 198 aaKnown RBP13.17□□□□□ -0.3
LRCH3-201ENST00000334859 Q8N1Y9 231 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 OR11H1Q8NG94 326 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 OR11H2Q8NH07 326 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 CST9LQ9H4G1 147 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 TP53TG1Q9Y2A0 90 aa13.17□□□□□ -0.3
LRCH3-201ENST00000334859 LGALS9O00182 355 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 FSHBP01225 129 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 PRSS29PA6NIE9 313 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 KRTAP10-9P60411 292 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 CEND1Q8N111 149 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 C9orf85Q96MD7 179 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 KIR2DL4Q99706 377 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 CR1P17927 2039 aa13.16□□□□□ -0.3
LRCH3-201ENST00000334859 RBX1P62877 108 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 ZNF56Q15929 161 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 NHP2Q9NX24 153 aaKnown RBP13.15□□□□□ -0.3
LRCH3-201ENST00000334859 IGHV1OR15-1A0A075B7D0 117 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 A0A1W2PPM0 123 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 SDHAF1A6NFY7 115 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 K7EP34 96 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 ZFP2Q6ZN57 461 aa13.15□□□□□ -0.3
LRCH3-201ENST00000334859 RPL32P62910 135 aaKnown RBP13.14□□□□□ -0.31
LRCH3-201ENST00000334859 RNF151Q2KHN1 245 aa13.14□□□□□ -0.31
LRCH3-201ENST00000334859 Q5PR19 223 aa13.14□□□□□ -0.31
LRCH3-201ENST00000334859 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
LRCH3-201ENST00000334859 VCYO14598 125 aa13.14□□□□□ -0.31
LRCH3-201ENST00000334859 POLR2KP53803 58 aaKnown RBP13.14□□□□□ -0.31
LRCH3-201ENST00000334859 TCTEX1D4Q5JR98 221 aa13.14□□□□□ -0.31
LRCH3-201ENST00000334859 TLN2Q9Y4G6 2542 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
LRCH3-201ENST00000334859 FOXI2Q6ZQN5 318 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 HIST1H4GQ99525 98 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 TM2D2Q9BX73 214 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 SPCS1Q9Y6A9 102 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 FABP2P12104 132 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 SLURP1P55000 103 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 SAMD5Q5TGI4 173 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 C18orf65Q6ZTR6 163 aa13.13□□□□□ -0.31
LRCH3-201ENST00000334859 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
LRCH3-201ENST00000334859 OCIAD2Q56VL3 154 aa13.12□□□□□ -0.31
LRCH3-201ENST00000334859 MYMXA0A1B0GTQ4 84 aa13.11□□□□□ -0.31
LRCH3-201ENST00000334859 PRADC1Q9BSG0 188 aa13.11□□□□□ -0.31
LRCH3-201ENST00000334859 EMP1P54849 157 aa13.11□□□□□ -0.31
LRCH3-201ENST00000334859 ZNF843Q8N446 348 aa13.11□□□□□ -0.31
LRCH3-201ENST00000334859 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
LRCH3-201ENST00000334859 TSHBP01222 138 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 SCGB2A2Q13296 93 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 DEFB113Q30KQ7 82 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 ZNF876PQ49A33 203 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 KHDC1LQ5JSQ8 128 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 RNF152Q8N8N0 203 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 IGIPA6NJ69 53 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 E9PLD3 99 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 HTN1P15515 57 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 TAL2Q16559 108 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
LRCH3-201ENST00000334859 TRBV27A0A0K0K1C4 114 aa13.09□□□□□ -0.31
LRCH3-201ENST00000334859 M0QY20 66 aa13.09□□□□□ -0.31
LRCH3-201ENST00000334859 CRYGDP07320 174 aa13.09□□□□□ -0.31
LRCH3-201ENST00000334859 Q96MF0 132 aa13.09□□□□□ -0.31
LRCH3-201ENST00000334859 TRBV6-5A0A0K0K1A5 114 aa13.09□□□□□ -0.31
LRCH3-201ENST00000334859 LINC01549A6NIU2 74 aa13.09□□□□□ -0.31
LRCH3-201ENST00000334859 CD300EQ496F6 205 aaPredicted RBP13.09□□□□□ -0.31
LRCH3-201ENST00000334859 PRRC2AP48634 2157 aaKnown RBP13.08□□□□□ -0.32
LRCH3-201ENST00000334859 TRGV11A0A075B6L2 103 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 C11orf86A6NJI1 115 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 DEFB131AP59861 70 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 PMVKQ15126 192 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
LRCH3-201ENST00000334859 DUX3Q96PT4 197 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 ZNF815PA8K554 130 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
LRCH3-201ENST00000334859 TMEM141Q96I45 108 aa13.08□□□□□ -0.32
LRCH3-201ENST00000334859 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
LRCH3-201ENST00000334859 RIPPLY3P57055 190 aa13.07□□□□□ -0.32
LRCH3-201ENST00000334859 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
LRCH3-201ENST00000334859 RBMY1A1P0DJD3 496 aaKnown RBP13.06□□□□□ -0.32
LRCH3-201ENST00000334859 RBMY1CP0DJD4 496 aa13.06□□□□□ -0.32
LRCH3-201ENST00000334859 RBMY1FQ15415 496 aaKnown RBP13.06□□□□□ -0.32
LRCH3-201ENST00000334859 SCGB1D4Q6XE38 83 aa13.06□□□□□ -0.32
LRCH3-201ENST00000334859 TRPT1Q86TN4 253 aaKnown RBP13.06□□□□□ -0.32
LRCH3-201ENST00000334859 APCP25054 2843 aa13.06□□□□□ -0.32
LRCH3-201ENST00000334859 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
LRCH3-201ENST00000334859 LINC01619G3V211 115 aa13.06□□□□□ -0.32
LRCH3-201ENST00000334859 K7ERU9 68 aa13.05□□□□□ -0.32
LRCH3-201ENST00000334859 HERVK_113P61574 105 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms