RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 MBD3L5A6NJ08 208 aaPredicted RBP8.85□□□□□ -0.99
CHFR-201ENST00000266880 MBD3L2Q8NHZ7 208 aaPredicted RBP8.85□□□□□ -0.99
CHFR-201ENST00000266880 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
CHFR-201ENST00000266880 PRR30Q53SZ7 412 aaPredicted RBP8.85□□□□□ -0.99
CHFR-201ENST00000266880 LINC01619G3V211 115 aa8.85□□□□□ -0.99
CHFR-201ENST00000266880 KIAA1671Q9BY89 1806 aa8.85□□□□□ -0.99
CHFR-201ENST00000266880 GNRH2O43555 120 aa8.85□□□□□ -0.99
CHFR-201ENST00000266880 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
CHFR-201ENST00000266880 DSCR9P59020 149 aa8.84□□□□□ -0.99
CHFR-201ENST00000266880 IGLV10-54A0A075B6I4 117 aa8.84□□□□□ -0.99
CHFR-201ENST00000266880 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
CHFR-201ENST00000266880 VOPP1Q96AW1 172 aa8.84□□□□□ -0.99
CHFR-201ENST00000266880 NDUFA4L2Q9NRX3 87 aa8.84□□□□□ -0.99
CHFR-201ENST00000266880 PLXNA4Q9HCM2 1894 aa8.83□□□□□ -1
CHFR-201ENST00000266880 IGHV4-59P01825 116 aa8.83□□□□□ -1
CHFR-201ENST00000266880 HIST2H2BCQ6DN03 193 aa8.83□□□□□ -1
CHFR-201ENST00000266880 TMEM14CQ9P0S9 112 aa8.83□□□□□ -1
CHFR-201ENST00000266880 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
CHFR-201ENST00000266880 IGKV1-6A0A0C4DH72 117 aa8.83□□□□□ -1
CHFR-201ENST00000266880 LTAP01374 205 aa8.83□□□□□ -1
CHFR-201ENST00000266880 TEX22C9J3V5 150 aa8.83□□□□□ -1
CHFR-201ENST00000266880 COL8A2P25067 703 aa8.83□□□□□ -1
CHFR-201ENST00000266880 WISP1O95388 367 aa8.83□□□□□ -1
CHFR-201ENST00000266880 FAM110DQ8TAY7 271 aaPredicted RBP8.83□□□□□ -1
CHFR-201ENST00000266880 C1orf53Q5VUE5 145 aa8.82□□□□□ -1
CHFR-201ENST00000266880 B4DSR2 109 aa8.82□□□□□ -1
CHFR-201ENST00000266880 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
CHFR-201ENST00000266880 MRPL36Q9P0J6 103 aaKnown RBP8.82□□□□□ -1
CHFR-201ENST00000266880 LECT2O14960 151 aa8.82□□□□□ -1
CHFR-201ENST00000266880 H0YGX0 51 aa8.82□□□□□ -1
CHFR-201ENST00000266880 J3QLI3 93 aa8.82□□□□□ -1
CHFR-201ENST00000266880 NRGNQ92686 78 aa8.82□□□□□ -1
CHFR-201ENST00000266880 LOXL1Q08397 574 aaPredicted RBP8.82□□□□□ -1
CHFR-201ENST00000266880 SEM1Q6ZVN7 128 aa8.82□□□□□ -1
CHFR-201ENST00000266880 IGKV2D-26A0A0A0MRZ7 120 aa8.82□□□□□ -1
CHFR-201ENST00000266880 IGLC6P0CF74 106 aa8.82□□□□□ -1
CHFR-201ENST00000266880 K7ERS5 55 aa8.81□□□□□ -1
CHFR-201ENST00000266880 NUPR1O60356 82 aa8.81□□□□□ -1
CHFR-201ENST00000266880 Q6ZS49 121 aa8.81□□□□□ -1
CHFR-201ENST00000266880 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
CHFR-201ENST00000266880 PRO0628Q9UI54 55 aa8.81□□□□□ -1
CHFR-201ENST00000266880 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
CHFR-201ENST00000266880 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
CHFR-201ENST00000266880 NUP210LQ5VU65 1888 aa8.81□□□□□ -1
CHFR-201ENST00000266880 APOC4P55056 127 aa8.81□□□□□ -1
CHFR-201ENST00000266880 LY6DQ14210 128 aa8.81□□□□□ -1
CHFR-201ENST00000266880 IGLV2-23P01705 113 aa8.8□□□□□ -1
CHFR-201ENST00000266880 C20orf197Q8N268 126 aa8.8□□□□□ -1
CHFR-201ENST00000266880 WI2-2373I1.2A0A1W2PRP0 233 aa8.8□□□□□ -1
CHFR-201ENST00000266880 ATG2AQ2TAZ0 1938 aa8.8□□□□□ -1
CHFR-201ENST00000266880 ANKHD1Q8IWZ3 2542 aaKnown RBP8.8□□□□□ -1
CHFR-201ENST00000266880 UBE2AP49459 152 aa8.8□□□□□ -1
CHFR-201ENST00000266880 IL15RAQ13261 267 aa8.8□□□□□ -1
CHFR-201ENST00000266880 CASC2Q6XLA1 102 aa8.79□□□□□ -1
CHFR-201ENST00000266880 TPSG1Q9NRR2 321 aa8.79□□□□□ -1
CHFR-201ENST00000266880 LYRM9A8MSI8 78 aa8.79□□□□□ -1
CHFR-201ENST00000266880 C17orf77Q96MU5 243 aa8.79□□□□□ -1
CHFR-201ENST00000266880 A6NED7 52 aa8.79□□□□□ -1
CHFR-201ENST00000266880 H3BQ85 93 aa8.79□□□□□ -1
CHFR-201ENST00000266880 IGHV7-4-1A0A0J9YVY3 117 aa8.79□□□□□ -1
CHFR-201ENST00000266880 LINC01356Q8N9X3 169 aa8.79□□□□□ -1
CHFR-201ENST00000266880 NDUFA4O00483 81 aa8.79□□□□□ -1
CHFR-201ENST00000266880 IGHV3-30P01768 117 aa8.79□□□□□ -1
CHFR-201ENST00000266880 IGHV3-33P01772 117 aa8.79□□□□□ -1
CHFR-201ENST00000266880 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
CHFR-201ENST00000266880 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
CHFR-201ENST00000266880 PPDPFQ9H3Y8 114 aa8.79□□□□□ -1
CHFR-201ENST00000266880 GYPEP15421 78 aa8.78□□□□□ -1
CHFR-201ENST00000266880 ZNF833PQ6ZTB9 187 aa8.78□□□□□ -1
CHFR-201ENST00000266880 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.78□□□□□ -1
CHFR-201ENST00000266880 COX7A2LO14548 114 aa8.78□□□□□ -1
CHFR-201ENST00000266880 TTTY13Q9BZ97 58 aa8.78□□□□□ -1
CHFR-201ENST00000266880 HIGD2BQ4VC39 106 aa8.78□□□□□ -1
CHFR-201ENST00000266880 MAPK1IP1LQ8NDC0 245 aa8.78□□□□□ -1
CHFR-201ENST00000266880 A0A0G2JNJ9 132 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 NPBQ8NG41 125 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 Q9UFV3 132 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 TEX49A0A1B0GTD5 131 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 ZFP36L1Q07352 338 aaKnown RBP8.77□□□□□ -1.01
CHFR-201ENST00000266880 FLVCR1-AS1Q8TAF5 88 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 HIST2H2BDQ6DRA6 164 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 TCL1BO95988 128 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 HIGD1BQ9P298 99 aa8.77□□□□□ -1.01
CHFR-201ENST00000266880 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 A0A0J9YXV3 536 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 IGLV3-9A0A075B6K5 115 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 A0A0J9YWU9 116 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 E9PLN8 166 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 RPL39P62891 51 aaKnown RBP8.76□□□□□ -1.01
CHFR-201ENST00000266880 PKD1L2Q7Z442 2459 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 USP17L23D6RBM5 183 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 WT1-ASQ06250 92 aa8.76□□□□□ -1.01
CHFR-201ENST00000266880 IGLV3-12A0A075B6K2 115 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 LINC00643Q86TS7 51 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 THSD7AQ9UPZ6 1657 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 BPY2O14599 106 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 COA6Q5JTJ3 125 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms