RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 RNF152Q8N8N0 203 aa14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 NAA38Q9BRA0 125 aaKnown RBP14.5□□□□□ -0.09
CDC42EP1-201ENST00000249014 Q5PR19 223 aa14.49□□□□□ -0.09
CDC42EP1-201ENST00000249014 FXYD2P54710 66 aa14.49□□□□□ -0.09
CDC42EP1-201ENST00000249014 DEFB136Q30KP8 78 aa14.49□□□□□ -0.09
CDC42EP1-201ENST00000249014 DEFB113Q30KQ7 82 aa14.49□□□□□ -0.09
CDC42EP1-201ENST00000249014 RAB37Q96AX2 223 aa14.49□□□□□ -0.09
CDC42EP1-201ENST00000249014 H3BUT2 72 aa14.48□□□□□ -0.09
CDC42EP1-201ENST00000249014 GCSHP23434 173 aa14.48□□□□□ -0.09
CDC42EP1-201ENST00000249014 POLR2KP53803 58 aaKnown RBP14.48□□□□□ -0.09
CDC42EP1-201ENST00000249014 NAV2Q8IVL1 2488 aa14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 F5H697 171 aa14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 DUSP14O95147 198 aaKnown RBP14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 SLURP1P55000 103 aa14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 RPL32P62910 135 aaKnown RBP14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 TCTEX1D4Q5JR98 221 aa14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 FAM74A4Q5TZK3 123 aa14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 AMTNQ6UX39 209 aa14.47□□□□□ -0.09
CDC42EP1-201ENST00000249014 ZNF469Q96JG9 3925 aaPredicted RBP14.46□□□□□ -0.09
CDC42EP1-201ENST00000249014 IGHV1OR15-1A0A075B7D0 117 aa14.46□□□□□ -0.1
CDC42EP1-201ENST00000249014 PRSS29PA6NIE9 313 aa14.46□□□□□ -0.1
CDC42EP1-201ENST00000249014 ZFP2Q6ZN57 461 aa14.46□□□□□ -0.1
CDC42EP1-201ENST00000249014 FOXI2Q6ZQN5 318 aa14.45□□□□□ -0.1
CDC42EP1-201ENST00000249014 Q96MF0 132 aa14.45□□□□□ -0.1
CDC42EP1-201ENST00000249014 TSHBP01222 138 aa14.44□□□□□ -0.1
CDC42EP1-201ENST00000249014 CREBBPQ92793 2442 aa14.44□□□□□ -0.1
CDC42EP1-201ENST00000249014 SDHAF1A6NFY7 115 aa14.44□□□□□ -0.1
CDC42EP1-201ENST00000249014 CRYGDP07320 174 aa14.44□□□□□ -0.1
CDC42EP1-201ENST00000249014 CYSLTR1Q9Y271 337 aa14.44□□□□□ -0.1
CDC42EP1-201ENST00000249014 TP53TG1Q9Y2A0 90 aa14.44□□□□□ -0.1
CDC42EP1-201ENST00000249014 GAGE10A6NGK3 116 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 UFSP1Q6NVU6 142 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 MORN3Q6PF18 240 aaPredicted RBP14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 Q8N2B8 174 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 IGIPA6NJ69 53 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 VCYO14598 125 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 RBMY1A1P0DJD3 496 aaKnown RBP14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 RBMY1CP0DJD4 496 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 RPL39P62891 51 aaKnown RBP14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 RBMY1FQ15415 496 aaKnown RBP14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 CEND1Q8N111 149 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 TM2D2Q9BX73 214 aa14.43□□□□□ -0.1
CDC42EP1-201ENST00000249014 KRTAP1-3Q8IUG1 177 aa14.42□□□□□ -0.1
CDC42EP1-201ENST00000249014 LRRC75A-AS1Q8N1F1 130 aa14.42□□□□□ -0.1
CDC42EP1-201ENST00000249014 SYT8Q8NBV8 401 aa14.42□□□□□ -0.1
CDC42EP1-201ENST00000249014 GAGE12BA1L429 117 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 KNCNA6PVL3 124 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 M0QY20 66 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 SMIM13P0DJ93 91 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 ZNF56Q15929 161 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 DUX3Q96PT4 197 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 KIR2DL4Q99706 377 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 APCP25054 2843 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 TRBV6-5A0A0K0K1A5 114 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 TRBV27A0A0K0K1C4 114 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 K7ERJ3 54 aa14.41□□□□□ -0.1
CDC42EP1-201ENST00000249014 OR11H12B2RN74 326 aa14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 RBX1P62877 108 aa14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 HIST2H2BDQ6DRA6 164 aa14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 OR11H1Q8NG94 326 aa14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 OR11H2Q8NH07 326 aa14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 CST9LQ9H4G1 147 aa14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 PHLDA1Q8WV24 401 aaPredicted RBP14.4□□□□□ -0.1
CDC42EP1-201ENST00000249014 A0A1W2PPM0 123 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 DEFB131AP59861 70 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 ZNF876PQ49A33 203 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 ZNF256Q9Y2P7 627 aaPredicted RBP14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 IGLV4-69A0A075B6H9 119 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 MYMXA0A1B0GTQ4 84 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 E9PLD3 99 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 K7EP34 96 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 GTF2H5Q6ZYL4 71 aa14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 NHP2Q9NX24 153 aaKnown RBP14.39□□□□□ -0.11
CDC42EP1-201ENST00000249014 LINC01619G3V211 115 aa14.38□□□□□ -0.11
CDC42EP1-201ENST00000249014 RIPPLY3P57055 190 aa14.38□□□□□ -0.11
CDC42EP1-201ENST00000249014 PRADC1Q9BSG0 188 aa14.38□□□□□ -0.11
CDC42EP1-201ENST00000249014 EMP1P54849 157 aa14.37□□□□□ -0.11
CDC42EP1-201ENST00000249014 CBY1Q9Y3M2 126 aa14.37□□□□□ -0.11
CDC42EP1-201ENST00000249014 MYO9AB2RTY4 2548 aa14.37□□□□□ -0.11
CDC42EP1-201ENST00000249014 C11orf86A6NJI1 115 aa14.37□□□□□ -0.11
CDC42EP1-201ENST00000249014 TAL2Q16559 108 aa14.37□□□□□ -0.11
CDC42EP1-201ENST00000249014 TMEM61Q8N0U2 210 aa14.37□□□□□ -0.11
CDC42EP1-201ENST00000249014 TRGV11A0A075B6L2 103 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 NBPF19A0A087WUL8 3843 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 RBMY1BA6NDE4 496 aaKnown RBP14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 RBMY1EA6NEQ0 496 aaKnown RBP14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 RBMY1DP0C7P1 496 aaKnown RBP14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 TLN2Q9Y4G6 2542 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 H3BMM0 161 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 HTN1P15515 57 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 PMVKQ15126 192 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 KHDC1LQ5JSQ8 128 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 C4orf3Q8WVX3 66 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 HIST1H4GQ99525 98 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 TIMM17AQ99595 171 aa14.36□□□□□ -0.11
CDC42EP1-201ENST00000249014 EPG5Q9HCE0 2579 aa14.35□□□□□ -0.11
CDC42EP1-201ENST00000249014 TRBV7-3A0A075B6L6 115 aa14.35□□□□□ -0.11
CDC42EP1-201ENST00000249014 LINC01549A6NIU2 74 aa14.35□□□□□ -0.11
CDC42EP1-201ENST00000249014 A8MTW9 85 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms