RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	NHP2	Q9NX24	153 aa	Known RBP	11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	VCY	O14598	125 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	SEC11A	P67812	179 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TRANK1	O15050	2925 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	IGLV11-55	A0A075B6I3	123 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	IGHV1OR15-1	A0A075B7D0	117 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TNFRSF13B	O14836	293 aa	Predicted RBP	11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	GNRH2	O43555	120 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TNFRSF6B	O95407	300 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	HILS1	P60008	231 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	SIRPD	Q9H106	197 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	CHD9	Q3L8U1	2897 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	NUP210L	Q5VU65	1888 aa		11.13	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ZNF815P	A8K554	130 aa		11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	MTURN	Q8N3F0	131 aa		11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	SAMD5	Q5TGI4	173 aa		11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	OR5A1	Q8NGJ0	315 aa		11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ZNF625	Q96I27	306 aa	Predicted RBP	11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	MYCNOS	P40205	109 aa		11.12	□□□□□ -0.63
NEDD4L-238	ENST00000635997	WDFY4	Q6ZS81	3184 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TRBV12-3	P01733	135 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	SLA	Q13239	276 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	IGKC	P01834	107 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	LGALS1	P09382	135 aa	Known RBP	11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	KIR3DS1	Q14943	382 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ZC2HC1B	Q5TFG8	222 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TRBV7-9	A0A0J9YWB2	115 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	SYS1-DBNDD2	H3BUS1	97 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	CGB3	P0DN86	165 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	CGB7	P0DN87	165 aa		11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	CHCHD1	Q96BP2	118 aa	Known RBP	11.11	□□□□□ -0.63
NEDD4L-238	ENST00000635997	IGLV2-23	P01705	113 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	BRWD1-AS2	P59051	145 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	NPB	Q8NG41	125 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	C18orf32	Q8TCD1	76 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TEX22	C9J3V5	150 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	AZU1	P20160	251 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	C11orf71	Q6IPW1	123 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997		V9GYV3	84 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	IGHV4OR15-8	A0A075B7B6	117 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997		A0A087WW49	117 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	DAD1	P61803	113 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ITPR3	Q14573	2671 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	DNAL4	O96015	105 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ZNRF2	Q8NHG8	242 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	SPX	Q9BT56	116 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TMEM14C	Q9P0S9	112 aa		11.1	□□□□□ -0.63
NEDD4L-238	ENST00000635997	PSCA	O43653	123 aa		11.09	□□□□□ -0.63
NEDD4L-238	ENST00000635997	BVES-AS1	Q5T3Y7	98 aa		11.09	□□□□□ -0.63
NEDD4L-238	ENST00000635997	TTC32	Q5I0X7	151 aa		11.09	□□□□□ -0.63
NEDD4L-238	ENST00000635997	LINC00158	P58513	81 aa		11.09	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ZNF292	O60281	2723 aa		11.09	□□□□□ -0.63
NEDD4L-238	ENST00000635997	FAM104B	Q5XKR9	115 aa		11.08	□□□□□ -0.63
NEDD4L-238	ENST00000635997	ADAMTS20	P59510	1910 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	EGR2	P11161	476 aa	Predicted RBP	11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	HSD52	Q0P140	79 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	UNQ9165/PRO28630	Q6UXU0	137 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	CFHR4	Q92496	578 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	ESM1	Q9NQ30	184 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	SDHAF1	A6NFY7	115 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	FRMD6-AS1	P0C7T7	363 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	CFAP54	Q96N23	3096 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	PRAC2	D3DTV9	90 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	BUB3	O43684	328 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997	ANAPC13	Q9BS18	74 aa		11.08	□□□□□ -0.64
NEDD4L-238	ENST00000635997		K7EN84	100 aa		11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997	FANCD2OS	Q96PS1	177 aa		11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997	ADAMTSL5	Q6ZMM2	481 aa		11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997	TMEM190	Q8WZ59	177 aa		11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997		A0A1W2PPR1	153 aa		11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997	MRPL51	Q4U2R6	128 aa	Known RBP	11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997	WIPF2	Q8TF74	440 aa	Predicted RBP	11.07	□□□□□ -0.64
NEDD4L-238	ENST00000635997		Q6YL49	198 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	ZNF492	Q9P255	531 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	HCFC1	P51610	2035 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	CHD6	Q8TD26	2715 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997		A0A0J9YY99	117 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	RASL11A	Q6T310	242 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	IL17D	Q8TAD2	202 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	PIFO	Q8TCI5	191 aa		11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	NOP10	Q9NPE3	64 aa	Known RBP	11.06	□□□□□ -0.64
NEDD4L-238	ENST00000635997	RNASE13	Q5GAN3	156 aa	Known RBP	11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	C6orf226	Q5I0X4	101 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	C2orf66	Q6UXQ4	117 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	ATP6V0B	Q99437	205 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	TP53TG1	Q9Y2A0	90 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	VWC2	Q2TAL6	325 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	NDUFA11	Q86Y39	141 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	C11orf52	Q96A22	123 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	MSRB1	Q9NZV6	116 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	IGHG2	P01859	326 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	GATA1	P15976	413 aa	Predicted RBP	11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997		Q6ZSV7	163 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	KMT2E	Q8IZD2	1858 aa		11.05	□□□□□ -0.64
NEDD4L-238	ENST00000635997	NPY	P01303	97 aa		11.04	□□□□□ -0.64
NEDD4L-238	ENST00000635997	PRB2	P02812	416 aa	Predicted RBP	11.04	□□□□□ -0.64
NEDD4L-238	ENST00000635997	PRSS46	E5RG02	174 aa		11.04	□□□□□ -0.64
NEDD4L-238	ENST00000635997	ETDB	Q3ZM63	59 aa		11.04	□□□□□ -0.64
NEDD4L-238	ENST00000635997		H3BUA1	57 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms