RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 IFITM3Q01628 133 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 GAGE1Q13065 139 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 GAGE4Q13068 117 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 GAGE5Q13069 117 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 PRNTQ86SH4 94 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.4
SMN2-215ENST00000628696 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.57□□□□□ -0.4
SMN2-215ENST00000628696 ZFP69Q49AA0 526 aa12.57□□□□□ -0.4
SMN2-215ENST00000628696 SMUG1Q53HV7 270 aa12.57□□□□□ -0.4
SMN2-215ENST00000628696 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
SMN2-215ENST00000628696 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
SMN2-215ENST00000628696 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
SMN2-215ENST00000628696 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
SMN2-215ENST00000628696 LINC00528Q8N1L1 170 aa12.56□□□□□ -0.4
SMN2-215ENST00000628696 PTH2Q96A98 100 aa12.56□□□□□ -0.4
SMN2-215ENST00000628696 SH3BGRL3Q9H299 93 aa12.56□□□□□ -0.4
SMN2-215ENST00000628696 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
SMN2-215ENST00000628696 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
SMN2-215ENST00000628696 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
SMN2-215ENST00000628696 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
SMN2-215ENST00000628696 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
SMN2-215ENST00000628696 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
SMN2-215ENST00000628696 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
SMN2-215ENST00000628696 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
SMN2-215ENST00000628696 GCHFRP30047 84 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 BAALCQ8WXS3 180 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 RAB24Q969Q5 203 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 PARLQ9H300 379 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
SMN2-215ENST00000628696 A8MWV9 139 aa12.53□□□□□ -0.4
SMN2-215ENST00000628696 GGTLC3B5MD39 225 aa12.53□□□□□ -0.4
SMN2-215ENST00000628696 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
SMN2-215ENST00000628696 TOR2AQ5JU69 321 aa12.53□□□□□ -0.4
SMN2-215ENST00000628696 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 Q6ZSA8 131 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 JPT2Q9H910 190 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 Q9UF83 564 aa12.52□□□□□ -0.41
SMN2-215ENST00000628696 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
SMN2-215ENST00000628696 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 IGKV3D-20A0A0C4DH25 116 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 RBFOX3A6NFN3 312 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 ASIPP42127 132 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 DEFA1P59665 94 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 DEFA3P59666 94 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
SMN2-215ENST00000628696 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
SMN2-215ENST00000628696 A0A087WWC5 75 aa12.49□□□□□ -0.41
SMN2-215ENST00000628696 KRTAP29-1A8MX34 341 aaPredicted RBP12.49□□□□□ -0.41
SMN2-215ENST00000628696 CXorf1O96002 111 aa12.49□□□□□ -0.41
SMN2-215ENST00000628696 ATP6V0CP27449 155 aa12.49□□□□□ -0.41
SMN2-215ENST00000628696 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
SMN2-215ENST00000628696 RMI2Q96E14 147 aa12.49□□□□□ -0.41
SMN2-215ENST00000628696 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
SMN2-215ENST00000628696 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
SMN2-215ENST00000628696 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
SMN2-215ENST00000628696 MBP02144 154 aa12.48□□□□□ -0.41
SMN2-215ENST00000628696 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
SMN2-215ENST00000628696 PSMG3Q9BT73 122 aaPredicted RBP12.48□□□□□ -0.41
SMN2-215ENST00000628696 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
SMN2-215ENST00000628696 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
SMN2-215ENST00000628696 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
SMN2-215ENST00000628696 Q8N976 141 aa12.47□□□□□ -0.41
SMN2-215ENST00000628696 DNAJC30Q96LL9 226 aa12.47□□□□□ -0.41
SMN2-215ENST00000628696 KLK12Q9UKR0 248 aa12.47□□□□□ -0.41
SMN2-215ENST00000628696 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
SMN2-215ENST00000628696 B4DEV8 164 aa12.46□□□□□ -0.41
SMN2-215ENST00000628696 H3BVH4 76 aa12.46□□□□□ -0.41
SMN2-215ENST00000628696 IFNA7P01567 189 aa12.46□□□□□ -0.41
SMN2-215ENST00000628696 SERF2P84101 59 aa12.46□□□□□ -0.41
SMN2-215ENST00000628696 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
SMN2-215ENST00000628696 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.41
SMN2-215ENST00000628696 NIT1Q86X76 327 aa12.45□□□□□ -0.42
SMN2-215ENST00000628696 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
SMN2-215ENST00000628696 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
SMN2-215ENST00000628696 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
SMN2-215ENST00000628696 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 GRIFINA4D1Z8 144 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 M0R036 132 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 RHODO00212 210 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 ARMS2P0C7Q2 107 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 UBE2G2P60604 165 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
SMN2-215ENST00000628696 A0A087WWL8 130 aa12.43□□□□□ -0.42
SMN2-215ENST00000628696 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
SMN2-215ENST00000628696 AQP10Q96PS8 301 aa12.43□□□□□ -0.42
SMN2-215ENST00000628696 CHAC1Q9BUX1 264 aa12.43□□□□□ -0.42
SMN2-215ENST00000628696 ALG5Q9Y673 324 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms