RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 IFITM3Q01628 133 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 GAGE1Q13065 139 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 GAGE4Q13068 117 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 GAGE5Q13069 117 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 PRNTQ86SH4 94 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.57□□□□□ -0.4
SMN1-211ENST00000625245 ZFP69Q49AA0 526 aa12.57□□□□□ -0.4
SMN1-211ENST00000625245 SMUG1Q53HV7 270 aa12.57□□□□□ -0.4
SMN1-211ENST00000625245 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
SMN1-211ENST00000625245 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
SMN1-211ENST00000625245 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
SMN1-211ENST00000625245 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
SMN1-211ENST00000625245 LINC00528Q8N1L1 170 aa12.56□□□□□ -0.4
SMN1-211ENST00000625245 PTH2Q96A98 100 aa12.56□□□□□ -0.4
SMN1-211ENST00000625245 SH3BGRL3Q9H299 93 aa12.56□□□□□ -0.4
SMN1-211ENST00000625245 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
SMN1-211ENST00000625245 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
SMN1-211ENST00000625245 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
SMN1-211ENST00000625245 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
SMN1-211ENST00000625245 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
SMN1-211ENST00000625245 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
SMN1-211ENST00000625245 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
SMN1-211ENST00000625245 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
SMN1-211ENST00000625245 GCHFRP30047 84 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 BAALCQ8WXS3 180 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 RAB24Q969Q5 203 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 PARLQ9H300 379 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
SMN1-211ENST00000625245 A8MWV9 139 aa12.53□□□□□ -0.4
SMN1-211ENST00000625245 GGTLC3B5MD39 225 aa12.53□□□□□ -0.4
SMN1-211ENST00000625245 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
SMN1-211ENST00000625245 TOR2AQ5JU69 321 aa12.53□□□□□ -0.4
SMN1-211ENST00000625245 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 Q6ZSA8 131 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 JPT2Q9H910 190 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 Q9UF83 564 aa12.52□□□□□ -0.41
SMN1-211ENST00000625245 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
SMN1-211ENST00000625245 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 IGKV3D-20A0A0C4DH25 116 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 RBFOX3A6NFN3 312 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 ASIPP42127 132 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 DEFA1P59665 94 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 DEFA3P59666 94 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
SMN1-211ENST00000625245 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
SMN1-211ENST00000625245 A0A087WWC5 75 aa12.49□□□□□ -0.41
SMN1-211ENST00000625245 KRTAP29-1A8MX34 341 aaPredicted RBP12.49□□□□□ -0.41
SMN1-211ENST00000625245 CXorf1O96002 111 aa12.49□□□□□ -0.41
SMN1-211ENST00000625245 ATP6V0CP27449 155 aa12.49□□□□□ -0.41
SMN1-211ENST00000625245 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
SMN1-211ENST00000625245 RMI2Q96E14 147 aa12.49□□□□□ -0.41
SMN1-211ENST00000625245 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
SMN1-211ENST00000625245 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
SMN1-211ENST00000625245 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
SMN1-211ENST00000625245 MBP02144 154 aa12.48□□□□□ -0.41
SMN1-211ENST00000625245 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
SMN1-211ENST00000625245 PSMG3Q9BT73 122 aaPredicted RBP12.48□□□□□ -0.41
SMN1-211ENST00000625245 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
SMN1-211ENST00000625245 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
SMN1-211ENST00000625245 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
SMN1-211ENST00000625245 Q8N976 141 aa12.47□□□□□ -0.41
SMN1-211ENST00000625245 DNAJC30Q96LL9 226 aa12.47□□□□□ -0.41
SMN1-211ENST00000625245 KLK12Q9UKR0 248 aa12.47□□□□□ -0.41
SMN1-211ENST00000625245 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
SMN1-211ENST00000625245 B4DEV8 164 aa12.46□□□□□ -0.41
SMN1-211ENST00000625245 H3BVH4 76 aa12.46□□□□□ -0.41
SMN1-211ENST00000625245 IFNA7P01567 189 aa12.46□□□□□ -0.41
SMN1-211ENST00000625245 SERF2P84101 59 aa12.46□□□□□ -0.41
SMN1-211ENST00000625245 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
SMN1-211ENST00000625245 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.41
SMN1-211ENST00000625245 NIT1Q86X76 327 aa12.45□□□□□ -0.42
SMN1-211ENST00000625245 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
SMN1-211ENST00000625245 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
SMN1-211ENST00000625245 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
SMN1-211ENST00000625245 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 GRIFINA4D1Z8 144 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 M0R036 132 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 RHODO00212 210 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 ARMS2P0C7Q2 107 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 UBE2G2P60604 165 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
SMN1-211ENST00000625245 A0A087WWL8 130 aa12.43□□□□□ -0.42
SMN1-211ENST00000625245 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
SMN1-211ENST00000625245 AQP10Q96PS8 301 aa12.43□□□□□ -0.42
SMN1-211ENST00000625245 CHAC1Q9BUX1 264 aa12.43□□□□□ -0.42
SMN1-211ENST00000625245 ALG5Q9Y673 324 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms