RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 ZNF747Q9BV97 191 aa9.18□□□□□ -0.94
AP3D1-206ENST00000589223 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
AP3D1-206ENST00000589223 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
AP3D1-206ENST00000589223 TMEM160Q9NX00 188 aa9.18□□□□□ -0.94
AP3D1-206ENST00000589223 HBDP02042 147 aa9.18□□□□□ -0.94
AP3D1-206ENST00000589223 C11orf44Q8N8P7 122 aa9.18□□□□□ -0.94
AP3D1-206ENST00000589223 FAM110DQ8TAY7 271 aaPredicted RBP9.18□□□□□ -0.94
AP3D1-206ENST00000589223 SMPXQ9UHP9 88 aa9.18□□□□□ -0.94
AP3D1-206ENST00000589223 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 LINC01545Q5VT33 79 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 IGHV4-59P01825 116 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 LEPP41159 167 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 MINOS1Q5TGZ0 78 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 METTL26Q96S19 204 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 MINOS1-NBL1R4GNA1 71 aa9.17□□□□□ -0.94
AP3D1-206ENST00000589223 PAX8Q06710 450 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 FOXC2Q99958 501 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 MAP1LC3AQ9H492 121 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 JPT2Q9H910 190 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 GNRH2O43555 120 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 MRAP2Q96G30 205 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 IGHV1-69DA0A0B4J2H0 117 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 IGHV1-69P01742 117 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
AP3D1-206ENST00000589223 RNASE4P34096 147 aaKnown RBP9.16□□□□□ -0.94
AP3D1-206ENST00000589223 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 DEFB136Q30KP8 78 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 EEF1AKMT3Q96AZ1 226 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 EMP1P54849 157 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 GTSCR1Q86UQ5 136 aa9.15□□□□□ -0.94
AP3D1-206ENST00000589223 MGPP08493 103 aa9.15□□□□□ -0.95
AP3D1-206ENST00000589223 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.95
AP3D1-206ENST00000589223 FABP5P3A8MUU1 101 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 FGF6P10767 208 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 EBI3Q14213 229 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 S100A4P26447 101 aaKnown RBP9.14□□□□□ -0.95
AP3D1-206ENST00000589223 Q6AWC8 147 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 C14orf178Q8N769 122 aaPredicted RBP9.14□□□□□ -0.95
AP3D1-206ENST00000589223 SYT8Q8NBV8 401 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 RNF183Q96D59 192 aa9.14□□□□□ -0.95
AP3D1-206ENST00000589223 B5MCH6 92 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 TGFAP01135 160 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
AP3D1-206ENST00000589223 MUC4Q99102 2169 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
AP3D1-206ENST00000589223 ZNF479Q96JC4 524 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 MOB4Q9Y3A3 225 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 GCN1Q92616 2671 aaKnown RBP9.13□□□□□ -0.95
AP3D1-206ENST00000589223 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 GPHB5Q86YW7 130 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 PIMREGQ9BSJ6 248 aa9.13□□□□□ -0.95
AP3D1-206ENST00000589223 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
AP3D1-206ENST00000589223 PDE6HQ13956 83 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 SHISA2Q6UWI4 295 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 SETXQ7Z333 2677 aaKnown RBP9.12□□□□□ -0.95
AP3D1-206ENST00000589223 A0A1B0GW15 77 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 APOMO95445 188 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 MYOZ3Q8TDC0 251 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 TMEM158Q8WZ71 300 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 MT-ATP8P03928 68 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 DEFB112Q30KQ8 113 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 KHDC1LQ5JSQ8 128 aa9.12□□□□□ -0.95
AP3D1-206ENST00000589223 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
AP3D1-206ENST00000589223 A0A087WWL8 130 aa9.11□□□□□ -0.95
AP3D1-206ENST00000589223 C1orf122Q6ZSJ8 110 aa9.11□□□□□ -0.95
AP3D1-206ENST00000589223 ZNF418Q8TF45 676 aaPredicted RBP9.11□□□□□ -0.95
AP3D1-206ENST00000589223 ANAPC13Q9BS18 74 aa9.11□□□□□ -0.95
AP3D1-206ENST00000589223 FAM74A4Q5TZK3 123 aa9.11□□□□□ -0.95
AP3D1-206ENST00000589223 C10orf105Q8TEF2 133 aa9.11□□□□□ -0.95
AP3D1-206ENST00000589223 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
AP3D1-206ENST00000589223 IGLC6P0CF74 106 aa9.1□□□□□ -0.95
AP3D1-206ENST00000589223 CHAC1Q9BUX1 264 aa9.1□□□□□ -0.95
AP3D1-206ENST00000589223 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
AP3D1-206ENST00000589223 TRAV12-3A0A0B4J271 114 aa9.09□□□□□ -0.95
AP3D1-206ENST00000589223 MSMBP08118 114 aa9.09□□□□□ -0.95
AP3D1-206ENST00000589223 HERV-K104P63124 156 aa9.09□□□□□ -0.95
AP3D1-206ENST00000589223 KLK9Q9UKQ9 250 aa9.09□□□□□ -0.95
AP3D1-206ENST00000589223 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
AP3D1-206ENST00000589223 IGHV3-73A0A0B4J1V6 119 aa9.08□□□□□ -0.96
AP3D1-206ENST00000589223 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
AP3D1-206ENST00000589223 IGHV7-4-1A0A0J9YVY3 117 aa9.08□□□□□ -0.96
AP3D1-206ENST00000589223 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
AP3D1-206ENST00000589223 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms