RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 HERC1Q15751 4861 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 FXYD6-FXYD2A0A087WZ82 144 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 LOC102724200A0A096LPH7 203 aaPredicted RBP2.62□□□□□ -1.99
VMP1-205ENST00000587470 HMSDA8MTL9 139 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 H3BMM0 161 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 ISLRO14498 428 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 PPP1R2P9O14990 202 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 COX7A2P2O60397 106 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 RPL7P18124 248 aaKnown RBP2.62□□□□□ -1.99
VMP1-205ENST00000587470 CXCL2P19875 107 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 ATP6V0CP27449 155 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 HLA-DMBP28068 263 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 NUP62P37198 522 aaPredicted RBP2.62□□□□□ -1.99
VMP1-205ENST00000587470 GALR1P47211 349 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 PSMB3P49720 205 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 GDF5OSQ5U4N7 250 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 C10orf113Q5VZT2 155 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 RPL7L1Q6DKI1 246 aaKnown RBP2.62□□□□□ -1.99
VMP1-205ENST00000587470 AMTNQ6UX39 209 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 MIR17HGQ75NE6 70 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 TCTE3Q8IZS6 198 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 KCNRGQ8N5I3 272 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 RPP25LQ8N5L8 163 aaKnown RBP2.62□□□□□ -1.99
VMP1-205ENST00000587470 Q8N9L7 120 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 OR2G3Q8NGZ4 309 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 FAM104AQ969W3 186 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 PPP1R14BQ96C90 147 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 GPR82Q96P67 336 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 SLC25A2Q9BXI2 301 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 SLC25A22Q9H936 323 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 ZNF331Q9NQX6 463 aaPredicted RBP2.62□□□□□ -1.99
VMP1-205ENST00000587470 ZNF586Q9NXT0 402 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 TMEM14CQ9P0S9 112 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 TIMM9Q9Y5J7 89 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
VMP1-205ENST00000587470 TRBV19A0A075B6N1 114 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 A0A0J9YX75 114 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 F6UB75 175 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 SLC17A3O00476 420 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 ARPC5O15511 151 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 EIF3GO75821 320 aaKnown RBP eCLIP2.61□□□□□ -1.99
VMP1-205ENST00000587470 IFNA5P01569 189 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 NBEAP1P0C6P0 100 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 PYYP10082 97 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 HIST1H1EP10412 219 aaKnown RBP2.61□□□□□ -1.99
VMP1-205ENST00000587470 HLA-DRB4P13762 266 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 M6PRP20645 277 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 RAB2AP61019 212 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 PSG3Q16557 428 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 LGALSLQ3ZCW2 172 aaPredicted RBP2.61□□□□□ -1.99
VMP1-205ENST00000587470 PSMG4Q5JS54 123 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 ACTL10Q5JWF8 245 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 FAM78BQ5VT40 261 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 FOXI2Q6ZQN5 318 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 BPIFA4PQ86YQ2 179 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 RNF182Q8N6D2 247 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 ZNF709Q8N972 641 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 INO80EQ8NBZ0 244 aaPredicted RBP2.61□□□□□ -1.99
VMP1-205ENST00000587470 LYPD6BQ8NI32 183 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 SUN5Q8TC36 379 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 SCGB1C1Q8TD33 95 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 FXYD5Q96DB9 178 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 PFDN5Q99471 154 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 RARRES2Q99969 163 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 PSMG3Q9BT73 122 aaPredicted RBP2.61□□□□□ -1.99
VMP1-205ENST00000587470 SH3BGRL3Q9H299 93 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 SAV1Q9H4B6 383 aaPredicted RBP2.61□□□□□ -1.99
VMP1-205ENST00000587470 RETNQ9HD89 108 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 RPRMQ9NS64 109 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 TP53TG1Q9Y2A0 90 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 HLA-DRB4X5D2U9 266 aa2.61□□□□□ -1.99
VMP1-205ENST00000587470 ABCA13Q86UQ4 5058 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 A0A0D9SG52 128 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 A0A1W2PPV4 95 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF705FA8MVS1 300 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 C17orf112F2Z3M2 114 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 M0R3E3 92 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 TAAR5O14804 337 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 CRXO43186 299 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF861PO60384 105 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 C1QBP02746 253 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF705DP0CH99 300 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF705BP0CI00 300 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 RBMY1A1P0DJD3 496 aaKnown RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 PRB4P10163 310 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 S100A7P31151 101 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 APOC4P55056 127 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 SNRPD3P62318 126 aaKnown RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 SERF2P84101 59 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 PDE6HQ13956 83 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF266Q14584 549 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF345Q14585 488 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 ZNF726P1Q15940 193 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 GUK1Q16774 197 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 ACOT6Q3I5F7 207 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 SAMD13Q5VXD3 122 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 LCN15Q6UWW0 184 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 LINC00336Q6ZUF6 198 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 SSX7Q7RTT5 188 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 S100A7AQ86SG5 101 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms