RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PHYHIPLQ96FC7 376 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 C9orf85Q96MD7 179 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 SLC39A9Q9NUM3 307 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 MCUBQ9NWR8 336 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 WDR83OSQ9Y284 106 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 URGCP-MRPS24S4R325 110 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 HLA-DQA1P01909 254 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 SLPIP03973 132 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 NBEAP1P0C6P0 100 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 CNBPP62633 177 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 ELOBQ15370 118 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 CTF1Q16619 201 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 GCSAMLQ5JQS6 135 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 ZNF506Q5JVG8 444 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 UFSP1Q6NVU6 142 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 REG3GQ6UW15 175 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 S100ZQ8WXG8 99 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 FXYD5Q96DB9 178 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 TVP23CQ96ET8 276 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 NAA50Q9GZZ1 169 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 PARLQ9H300 379 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 C11orf21Q9P2W6 132 aa4.8□□□□□ -1.64
HERPUD1-206ENST00000563343 TRAV21A0A0B4J279 112 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 C7orf66A4D0T2 115 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 ZFP2Q6ZN57 461 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 C14orf178Q8N769 122 aaPredicted RBP4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 TMED6Q8WW62 240 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 C20orf85Q9H1P6 137 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 GPN1Q9HCN4 374 aaPredicted RBP4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 SDF2L1Q9HCN8 221 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 VAX2Q9UIW0 290 aa4.79□□□□□ -1.64
HERPUD1-206ENST00000563343 A0A087WX48 190 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 MUC21A0A0G2JKD1 596 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 F6UZH7 168 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 RNASE3P12724 160 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 IL18Q14116 193 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 MIR17HGQ75NE6 70 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 OR2T35Q8NGX2 323 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 DYNC2LI1Q8TCX1 351 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 ASB13Q8WXK3 278 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 ATP5SQ99766 215 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 C11orf1Q9H5F2 150 aa4.78□□□□□ -1.64
HERPUD1-206ENST00000563343 IGHV3-64A0A075B6Q5 118 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 C9orf170A2RU37 121 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 H3BMQ9 156 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 RGS5O15539 181 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 MBPP02686 304 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 FGF8P55075 233 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 RGS21Q2M5E4 152 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 MPV17L2Q567V2 206 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 Q6ZNX1 250 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 OR10G7Q8NGN6 311 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 RAB24Q969Q5 203 aa4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 SLC25A21Q9BQT8 299 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 RABL2AQ9UBK7 228 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-206ENST00000563343 UBE2L5PA0A1B0GUS4 154 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 PGPA6NDG6 321 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 FAM24AA6NFZ4 105 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 CST7O76096 145 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 CSN1S1P47710 185 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 ZNF80P51504 273 aaPredicted RBP4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 RANP62826 216 aaKnown RBP4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 VAMP2P63027 116 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 MIAQ16674 131 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 C15orf54Q8N8G6 183 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 TMEM75Q8N9X5 138 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 DIRAS2Q96HU8 199 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 JPT2Q9H910 190 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 UQCC1Q9NVA1 299 aa4.76□□□□□ -1.65
HERPUD1-206ENST00000563343 A8MWV9 139 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 TNFRSF6BO95407 300 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 CRPP02741 224 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 BAXQ07812 192 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 IAH1Q2TAA2 248 aaPredicted RBP4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 PIK3CD-AS1Q5SR53 167 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 MCFD2Q8NI22 146 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 GTSF1Q8WW33 167 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 DPH3Q96FX2 82 aa4.75□□□□□ -1.65
HERPUD1-206ENST00000563343 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 H7C1H1 209 aa4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 ANGP03950 147 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 TCRBP04435 133 aa4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 FAUP35544 74 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 UBE2D3P61077 147 aa4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 UBE2D2P62837 147 aa4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 TREM1Q9NP99 234 aa4.74□□□□□ -1.65
HERPUD1-206ENST00000563343 TRBV6-8A0A0A6YYG3 113 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 hDV102S1A0JD36 115 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 CCSO14618 274 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 TAAR5O14804 337 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 FGF7P21781 194 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms