RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 CHD8Q9HCK8 2581 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 DOCK11Q5JSL3 2073 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 SSC5DA1L4H1 1573 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 VIRMAQ69YN4 1812 aaKnown RBP-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 LAMA5O15230 3695 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 RBAKDNA6NC62 111 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 C9JAW5 83 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 M0R3E3 92 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 OR2H2O95918 312 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 IFNA21P01568 189 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 APOC1P02654 83 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 SRP9P49458 86 aaKnown RBP-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 ELOF1P60002 83 aaKnown RBP-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 INSL4Q14641 139 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 Q5VV11 94 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 OR8J3Q8NGG0 315 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 PPDPFLQ8WWR9 84 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 BCL9LQ86UU0 1499 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 ARAP1Q96P48 1450 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 KIAA0100Q14667 2235 aaKnown RBP-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 CNOT1A5YKK6 2376 aaKnown RBP-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 WDR97A6NE52 1622 aa-0.49□□□□□ -2.49
LINC00871-202ENST00000556071 TNS1Q9HBL0 1735 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 FLNBO75369 2602 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 USH2AO75445 5202 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 SPTA1P02549 2419 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TRBV7-6A0A0J9YX20 115 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TRBV27A0A0K0K1C4 114 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 CXorf51AA0A1B0GTR3 108 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 LOC107986453A0A1B0GWG9 222 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TMEM14DPA8MWL7 114 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 IGKCP01834 107 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 BCL2P10415 239 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 S100A11P31949 105 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 LSM3P62310 102 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 SSBP1Q04837 148 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 Q6ZRX8 168 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 Q8IZM0 81 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TEX29Q8N6K0 151 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 OR4S1Q8NGB4 309 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 OR5A2Q8NGI9 324 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TMEM141Q96I45 108 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 BATF3Q9NR55 127 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 SCP2D1Q9UJQ7 156 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TCOF1Q13428 1488 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 PPRC1Q5VV67 1664 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 RREB1Q92766 1687 aa-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 URB1O60287 2271 aaKnown RBP-0.5□□□□□ -2.49
LINC00871-202ENST00000556071 TRBV10-3A0A0K0K1G6 114 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 M0R2P5 195 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 CDC42EP2O14613 210 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 SPRR2EP22531 72 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 BASP1P80723 227 aaKnown RBP-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 SPAG11BQ08648 103 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 OR8B8Q15620 311 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 DCUN1D2Q6PH85 259 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 LINC00305Q7Z4B0 112 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 MORN4Q8NDC4 146 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 SMIM7Q9BQ49 75 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 YTHDC2Q9H6S0 1430 aaKnown RBP-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 PLCE1Q9P212 2302 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 PRO0255Q9UI72 69 aa-0.51□□□□□ -2.49
LINC00871-202ENST00000556071 PI4KAP42356 2102 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 UHRF1BP1LA0JNW5 1464 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 PNMA8CA0A1B0GUJ8 204 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 ZNF815PA8K554 130 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 ZNF670-ZNF695F2Z2N8 137 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 EDF1O60869 148 aaKnown RBP-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 COX4I1P13073 169 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 CCL3L1P16619 93 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 SERPINB1P30740 379 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 GTF2A1P52655 376 aaPredicted RBP-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 OR2T2Q6IF00 324 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 SLC48A1Q6P1K1 146 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 SSBP3-AS1Q7Z2R9 100 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 UBE2DNLQ8IWF7 75 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 USF3Q68DE3 2245 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 MYH1P12882 1939 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 PLXNA2O75051 1894 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 KIDINS220Q9ULH0 1771 aa-0.52□□□□□ -2.49
LINC00871-202ENST00000556071 ZNF142P52746 1687 aaPredicted RBP-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 PCNX1Q96RV3 2341 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 SETD2Q9BYW2 2564 aaPredicted RBP-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 HYDINQ4G0P3 5121 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 TRBV7-1A0A0A6YYK4 115 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 MAP1LC3B2A6NCE7 125 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 SLC25A4P12235 298 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 IL7P13232 177 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 ADCYAP1P18509 176 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 GCHFRP30047 84 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 POLR2JP52435 117 aaKnown RBP-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 CRYBA4P53673 196 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 RBM3P98179 157 aaKnown RBP-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 PLGLB1Q02325 96 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 FAM74A4Q5TZK3 123 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 C3orf33Q6P1S2 294 aa-0.53□□□□□ -2.49
LINC00871-202ENST00000556071 UNQ5815/PRO19632Q6UWF5 114 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms