RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 RNASE3P12724 160 aaKnown RBP13.22□□□□□ -0.29
PRKCH-219ENST00000555906 SUMO1P63165 101 aaKnown RBP13.22□□□□□ -0.29
PRKCH-219ENST00000555906 PRNTQ86SH4 94 aa13.22□□□□□ -0.29
PRKCH-219ENST00000555906 ACTR3CQ9C0K3 210 aaPredicted RBP13.22□□□□□ -0.29
PRKCH-219ENST00000555906 SH3BGRL3Q9H299 93 aa13.22□□□□□ -0.29
PRKCH-219ENST00000555906 TNFSF18Q9UNG2 199 aa13.22□□□□□ -0.29
PRKCH-219ENST00000555906 MYCBP2O75592 4640 aa13.22□□□□□ -0.29
PRKCH-219ENST00000555906 IGLV5-52A0A0A0MRZ9 124 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 IGHV3-73A0A0B4J1V6 119 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 PGPEP1LA6NFU8 196 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 PTTG1O95997 202 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 LAGE3Q14657 143 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 SAPCD1Q5SSQ6 148 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 GTSF1LQ9H1H1 148 aa13.21□□□□□ -0.29
PRKCH-219ENST00000555906 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
PRKCH-219ENST00000555906 PIK3CD-AS1Q5SR53 167 aa13.2□□□□□ -0.3
PRKCH-219ENST00000555906 TMEM70Q9BUB7 260 aa13.2□□□□□ -0.3
PRKCH-219ENST00000555906 MED28Q9H204 178 aa13.2□□□□□ -0.3
PRKCH-219ENST00000555906 Q9HAA7 133 aa13.2□□□□□ -0.3
PRKCH-219ENST00000555906 LINC00694P0DN24 101 aa13.19□□□□□ -0.3
PRKCH-219ENST00000555906 Q8N814 137 aa13.19□□□□□ -0.3
PRKCH-219ENST00000555906 ATP6V0E2Q8NHE4 81 aa13.19□□□□□ -0.3
PRKCH-219ENST00000555906 PARLQ9H300 379 aa13.19□□□□□ -0.3
PRKCH-219ENST00000555906 A8MWV9 139 aa13.18□□□□□ -0.3
PRKCH-219ENST00000555906 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
PRKCH-219ENST00000555906 IGHV3-33P01772 117 aa13.18□□□□□ -0.3
PRKCH-219ENST00000555906 IGHV3-30-3P0DP02 117 aa13.18□□□□□ -0.3
PRKCH-219ENST00000555906 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
PRKCH-219ENST00000555906 ZFP2Q6ZN57 461 aa13.18□□□□□ -0.3
PRKCH-219ENST00000555906 IGKV3D-20A0A0C4DH25 116 aa13.17□□□□□ -0.3
PRKCH-219ENST00000555906 GIPP09681 153 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-219ENST00000555906 Q86TA4 180 aa13.17□□□□□ -0.3
PRKCH-219ENST00000555906 ARL2-SNX15V9GYD0 113 aa13.17□□□□□ -0.3
PRKCH-219ENST00000555906 CTXND1A0A1B0GTU2 59 aa13.16□□□□□ -0.3
PRKCH-219ENST00000555906 RNF222A6NCQ9 220 aa13.16□□□□□ -0.3
PRKCH-219ENST00000555906 S100A4P26447 101 aaKnown RBP13.16□□□□□ -0.3
PRKCH-219ENST00000555906 ASIPP42127 132 aa13.16□□□□□ -0.3
PRKCH-219ENST00000555906 INO80EQ8NBZ0 244 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-219ENST00000555906 SRRM2Q9UQ35 2752 aaKnown RBP13.16□□□□□ -0.3
PRKCH-219ENST00000555906 BORCS7-ASMTA0A0B4J1R7 106 aa13.15□□□□□ -0.3
PRKCH-219ENST00000555906 PEX7O00628 323 aa13.15□□□□□ -0.3
PRKCH-219ENST00000555906 ZNF726P1Q15940 193 aa13.15□□□□□ -0.3
PRKCH-219ENST00000555906 Q5BKY6 102 aa13.15□□□□□ -0.3
PRKCH-219ENST00000555906 RPL7L1Q6DKI1 246 aaKnown RBP13.15□□□□□ -0.3
PRKCH-219ENST00000555906 LINC00479Q96M42 142 aa13.15□□□□□ -0.3
PRKCH-219ENST00000555906 IL36BQ9NZH7 164 aa13.15□□□□□ -0.3
PRKCH-219ENST00000555906 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
PRKCH-219ENST00000555906 FABP5P3A8MUU1 101 aa13.14□□□□□ -0.31
PRKCH-219ENST00000555906 Q6ZSN1 163 aa13.14□□□□□ -0.31
PRKCH-219ENST00000555906 TM2D2Q9BX73 214 aa13.14□□□□□ -0.31
PRKCH-219ENST00000555906 BATF3Q9NR55 127 aa13.14□□□□□ -0.31
PRKCH-219ENST00000555906 FLG2Q5D862 2391 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-219ENST00000555906 IFNA7P01567 189 aa13.13□□□□□ -0.31
PRKCH-219ENST00000555906 SMR3BP02814 79 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-219ENST00000555906 HAMPP81172 84 aa13.13□□□□□ -0.31
PRKCH-219ENST00000555906 LGALSLQ3ZCW2 172 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-219ENST00000555906 UFSP1Q6NVU6 142 aa13.13□□□□□ -0.31
PRKCH-219ENST00000555906 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-219ENST00000555906 GAGE12JA6NER3 117 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 B4DEV8 164 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 FAM229AH3BQW9 127 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 RHODO00212 210 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 UBE2G2P60604 165 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 GAGE1Q13065 139 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 GAGE4Q13068 117 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 GAGE5Q13069 117 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 HIST1H2BAQ96A08 127 aa13.12□□□□□ -0.31
PRKCH-219ENST00000555906 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
PRKCH-219ENST00000555906 FAM74A7A6NL05 159 aa13.11□□□□□ -0.31
PRKCH-219ENST00000555906 H3BVH4 76 aa13.11□□□□□ -0.31
PRKCH-219ENST00000555906 C1QBP02746 253 aa13.11□□□□□ -0.31
PRKCH-219ENST00000555906 FGF8P55075 233 aaPredicted RBP13.11□□□□□ -0.31
PRKCH-219ENST00000555906 DNLZQ5SXM8 178 aa13.11□□□□□ -0.31
PRKCH-219ENST00000555906 Q8N3U1 123 aa13.11□□□□□ -0.31
PRKCH-219ENST00000555906 A0A087WWC5 75 aa13.1□□□□□ -0.31
PRKCH-219ENST00000555906 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
PRKCH-219ENST00000555906 TOR2AQ5JU69 321 aa13.1□□□□□ -0.31
PRKCH-219ENST00000555906 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
PRKCH-219ENST00000555906 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
PRKCH-219ENST00000555906 ZC2HC1AQ96GY0 325 aa13.1□□□□□ -0.31
PRKCH-219ENST00000555906 WFDC2Q14508 124 aa13.09□□□□□ -0.31
PRKCH-219ENST00000555906 AKR1C8PQ5T2L2 129 aa13.09□□□□□ -0.31
PRKCH-219ENST00000555906 C14orf178Q8N769 122 aaPredicted RBP13.09□□□□□ -0.31
PRKCH-219ENST00000555906 OR2T35Q8NGX2 323 aa13.09□□□□□ -0.31
PRKCH-219ENST00000555906 SAMD10Q9BYL1 202 aa13.09□□□□□ -0.31
PRKCH-219ENST00000555906 JPT2Q9H910 190 aa13.09□□□□□ -0.31
PRKCH-219ENST00000555906 KRBOX1C9JBD0 128 aa13.08□□□□□ -0.32
PRKCH-219ENST00000555906 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
PRKCH-219ENST00000555906 OR11H4Q8NGC9 324 aa13.08□□□□□ -0.32
PRKCH-219ENST00000555906 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
PRKCH-219ENST00000555906 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.32
PRKCH-219ENST00000555906 ZFP30Q9Y2G7 519 aa13.08□□□□□ -0.32
PRKCH-219ENST00000555906 MAP1LC3B2A6NCE7 125 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 M0R036 132 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 SH2D1AO60880 128 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 CRIP1P50238 77 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 FAM162BQ5T6X4 162 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 DAZ4Q86SG3 579 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms