RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 C9orf170A2RU37 121 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 RS1O15537 224 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF253O75346 499 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 EVI2AP22794 236 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 CAV2P51636 162 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 RPL37AP61513 92 aaKnown RBP1.97□□□□□ -2.09
SLIRP-202ENST00000553981 SSBP1Q04837 148 aaKnown RBP1.97□□□□□ -2.09
SLIRP-202ENST00000553981 IL15RAQ13261 267 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 IL18Q14116 193 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 VWC2Q2TAL6 325 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM128Q5BJH2 165 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 CFAP126Q5VTH2 177 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 C10orf113Q5VZT2 155 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 Q6AWC8 147 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 UFSP1Q6NVU6 142 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 ENHOQ6UWT2 76 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 NRARPQ7Z6K4 114 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 BPIFA4PQ86YQ2 179 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 C14orf178Q8N769 122 aaPredicted RBP1.97□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF680Q8NEM1 530 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 LRRC20Q8TCA0 184 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 FXYD5Q96DB9 178 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 DIRAS2Q96HU8 199 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 SGK494Q96LW2 274 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 PRRT1Q99946 306 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 MCUBQ9NWR8 336 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 WDR83OSQ9Y284 106 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 KCNIP3Q9Y2W7 256 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 MUC2Q02817 5179 aa1.97□□□□□ -2.09
SLIRP-202ENST00000553981 TRAV8-1A0A0A6YYK1 113 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 FNDC10F2Z333 226 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 F6UZH7 168 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 RGS5O15539 181 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 PSCAO43653 123 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 CST7O76096 145 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 FABP1P07148 127 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 GPX1P07203 203 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 OR10J4P0C629 311 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 CHTF8P0CG12 524 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 HIST1H1EP10412 219 aaKnown RBP1.96□□□□□ -2.1
SLIRP-202ENST00000553981 RNASE3P12724 160 aaKnown RBP1.96□□□□□ -2.1
SLIRP-202ENST00000553981 SELENOTP62341 195 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 ZNF266Q14584 549 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 SDIM1Q6ZPB5 146 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 ZNF546Q86UE3 836 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 MRPL53Q96EL3 112 aaKnown RBP1.96□□□□□ -2.1
SLIRP-202ENST00000553981 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 C9orf85Q96MD7 179 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 CIB3Q96Q77 187 aaPredicted RBP1.96□□□□□ -2.1
SLIRP-202ENST00000553981 SLC25A31Q9H0C2 315 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 SLC39A9Q9NUM3 307 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 TMEM14CQ9P0S9 112 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 PXMP4Q9Y6I8 212 aa1.96□□□□□ -2.1
SLIRP-202ENST00000553981 IGLV7-46A0A075B6I9 117 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 TRAV9-2A0A087WT02 112 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 RBFOX3A6NFN3 312 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 C9JCJ5 164 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 GOSR2O14653 212 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 PLA2G10O15496 165 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 COX7A2P2O60397 106 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 TSC22D2O75157 780 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 MED6O75586 246 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 RPL29P47914 159 aaKnown RBP1.95□□□□□ -2.1
SLIRP-202ENST00000553981 CAMLGP49069 296 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 CAMPP49913 170 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 ZNF138P52744 262 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 GNG5P63218 68 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 MRPS10P82664 201 aaKnown RBP1.95□□□□□ -2.1
SLIRP-202ENST00000553981 SLAQ13239 276 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 UBE2V1Q13404 147 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 CIRBPQ14011 172 aaKnown RBP1.95□□□□□ -2.1
SLIRP-202ENST00000553981 TDRG1Q3Y452 100 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 OR10J3Q5JRS4 329 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 ZNF506Q5JVG8 444 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 ATRAIDQ6UW56 229 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 NIT1Q86X76 327 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 C10orf126Q8N4M7 172 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 TMEM252Q8N6L7 170 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 NHLRC2Q8NBF2 726 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 INO80EQ8NBZ0 244 aaPredicted RBP1.95□□□□□ -2.1
SLIRP-202ENST00000553981 OR4C5Q8NGB2 326 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 ATP6V0E2Q8NHE4 81 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 LINC01600Q96MT4 127 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 BCL7BQ9BQE9 202 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 SEC22CQ9BRL7 303 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 SRRQ9GZT4 340 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 GTSF1LQ9H1H1 148 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 PARLQ9H300 379 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 VCX3BQ9H321 246 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 SCP2D1Q9UJQ7 156 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 KLK12Q9UKR0 248 aa1.95□□□□□ -2.1
SLIRP-202ENST00000553981 UBE2L5PA0A1B0GUS4 154 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 TRBV6-4A0A1B0GX49 114 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 FABP12A6NFH5 140 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 H3BMQ9 156 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 K7EP13 123 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 M0R2P5 195 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 NDUFB6O95139 128 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 SCGB1D1O95968 90 aa1.94□□□□□ -2.1
SLIRP-202ENST00000553981 ORM1P02763 201 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms