RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 DEFB131BA0A096LNP1 70 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 PIGBOS1A0A0B4J2F0 54 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 SMIM9A6NGZ8 99 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 KRBOX1C9JBD0 128 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 DEFB4AO15263 64 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 IFNA10P01566 189 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 PMP2P02689 132 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 FABP1P07148 127 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 SLC25A4P12235 298 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 LGALS3P17931 250 aaKnown RBP2.72□□□□□ -1.97
PCNX1-205ENST00000553508 CDC34P49427 236 aaPredicted RBP2.72□□□□□ -1.97
PCNX1-205ENST00000553508 TAS2R20P59543 309 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 CD164Q04900 197 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 DHRS2Q13268 280 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 RNASE10Q5GAN6 216 aaKnown RBP2.72□□□□□ -1.97
PCNX1-205ENST00000553508 PSMG4Q5JS54 123 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 SPATA31B1PQ5VZV4 182 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 Q8NAQ8 132 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 OR5H6Q8NGV6 325 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 RNASEH2CQ8TDP1 164 aaKnown RBP2.72□□□□□ -1.97
PCNX1-205ENST00000553508 Q8WTZ3 238 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 FAM19A4Q96LR4 140 aa2.72□□□□□ -1.97
PCNX1-205ENST00000553508 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
PCNX1-205ENST00000553508 TRAV8-6A0A0B4J262 113 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 MEIS3P1A6NDR6 274 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 TAAR5O14804 337 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 IGLV6-57P01721 117 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 SPART-AS1P0CW21 52 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 PVALBP20472 110 aaPredicted RBP2.71□□□□□ -1.98
PCNX1-205ENST00000553508 CRYBB3P26998 211 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 HLA-DMAP28067 261 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 S100A7P31151 101 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 RPL5P46777 297 aaKnown RBP2.71□□□□□ -1.98
PCNX1-205ENST00000553508 SPCS3P61009 180 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
PCNX1-205ENST00000553508 NEDD8Q15843 81 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 LGALS9BQ3B8N2 356 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 TTC32Q5I0X7 151 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 OR10J3Q5JRS4 329 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 OR4X1Q8NH49 305 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 DYNC2LI1Q8TCX1 351 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 RXFP4Q8TDU9 374 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 AP3S1Q92572 193 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 FXYD6Q9H0Q3 95 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 COPZ2Q9P299 210 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 VAX2Q9UIW0 290 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 NAGKQ9UJ70 344 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 APLNQ9ULZ1 77 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 ANAPC10Q9UM13 185 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 HECTD4Q9Y4D8 3996 aa2.71□□□□□ -1.98
PCNX1-205ENST00000553508 C3orf85A0A1B0GTC6 90 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 KNCNA6PVL3 124 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 CEBPZOSA8MTT3 80 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 PSPHP1O15172 72 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 ORM1P02763 201 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 OR10J1P30954 320 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 ETV6P41212 452 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 EMP1P54849 157 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 PIGPP57054 158 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 YPEL3P61236 119 aaPredicted RBP2.7□□□□□ -1.98
PCNX1-205ENST00000553508 SPINK9Q5DT21 86 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 EBLN2Q6P2I7 272 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 SNX29P2Q8IUI4 249 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 PPP1R14BQ96C90 147 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 TMEM208Q9BTX3 173 aa2.7□□□□□ -1.98
PCNX1-205ENST00000553508 SPANXB1Q9NS25 103 aaPredicted RBP2.7□□□□□ -1.98
PCNX1-205ENST00000553508 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.7□□□□□ -1.98
PCNX1-205ENST00000553508 C14orf166Q9Y224 244 aaKnown RBP2.7□□□□□ -1.98
PCNX1-205ENST00000553508 HUWE1Q7Z6Z7 4374 aaKnown RBP2.7□□□□□ -1.98
PCNX1-205ENST00000553508 A0A087WXM4 84 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 FAM25AB3EWG3 89 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 FAM25CB3EWG5 89 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 FAM25GB3EWG6 89 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 GABARAPH6UMI1 98 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 ISLRO14498 428 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 CFDP00746 253 aaPredicted RBP2.69□□□□□ -1.98
PCNX1-205ENST00000553508 IGKV1-5P01602 117 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 IGLC1P0CG04 106 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 HLA-DRB4P13762 266 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 PSMB3P49720 205 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 B2MP61769 119 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 MRPS10P82664 201 aaKnown RBP2.69□□□□□ -1.98
PCNX1-205ENST00000553508 SURF2Q15527 256 aaPredicted RBP2.69□□□□□ -1.98
PCNX1-205ENST00000553508 C12orf74Q32Q52 190 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 SCGB2B2Q4G0G5 96 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 C1orf194Q5T5A4 169 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 FOXI2Q6ZQN5 318 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 S100A7AQ86SG5 101 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 FAM24BQ8N5W8 94 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 C15orf53Q8NAA6 179 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 DCANP1Q8TF63 244 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 RBPMSQ93062 196 aaKnown RBP2.69□□□□□ -1.98
PCNX1-205ENST00000553508 MRAP2Q96G30 205 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 ACY3Q96HD9 319 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 TMEM243Q9BU79 118 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 PBDC1Q9BVG4 233 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 TMEM222Q9H0R3 208 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 COMMD3Q9UBI1 195 aa2.69□□□□□ -1.98
PCNX1-205ENST00000553508 HLA-DRB4X5D2U9 266 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms