RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 DPH3P1Q9H4G8 78 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 TREM1Q9NP99 234 aa8.19□□□□□ -1.1
VPS29-211ENST00000553128 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
VPS29-211ENST00000553128 A0A087WX48 190 aa8.18□□□□□ -1.1
VPS29-211ENST00000553128 HLA-DQA1P01909 254 aa8.18□□□□□ -1.1
VPS29-211ENST00000553128 UBE2L3P68036 154 aaKnown RBP8.18□□□□□ -1.1
VPS29-211ENST00000553128 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
VPS29-211ENST00000553128 UFSP1Q6NVU6 142 aa8.18□□□□□ -1.1
VPS29-211ENST00000553128 ZC2HC1AQ96GY0 325 aa8.18□□□□□ -1.1
VPS29-211ENST00000553128 PHOX2AO14813 284 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 SEC11BP0C7V7 166 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 BTCP35070 178 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 PTH2Q96A98 100 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 NMES1Q9C002 83 aa8.17□□□□□ -1.1
VPS29-211ENST00000553128 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 PGPA6NDG6 321 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 S100A10P60903 97 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 GNG5P63218 68 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 HBG1P69891 147 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 HBG2P69892 147 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 Q0VG73 95 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 ATP6V1FQ16864 119 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 STX12Q86Y82 276 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 HSD17B11Q8NBQ5 300 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 OR10G9Q8NGN4 311 aa8.16□□□□□ -1.1
VPS29-211ENST00000553128 A0A087WYN8 130 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 NHLH2Q02577 135 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 RAB32Q13637 225 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 ELOBQ15370 118 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 C15orf54Q8N8G6 183 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 OTORQ9NRC9 128 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
VPS29-211ENST00000553128 H3BMQ9 156 aa8.14□□□□□ -1.11
VPS29-211ENST00000553128 PVALBP20472 110 aaPredicted RBP8.14□□□□□ -1.11
VPS29-211ENST00000553128 FGF8P55075 233 aaPredicted RBP8.14□□□□□ -1.11
VPS29-211ENST00000553128 LGALSLQ3ZCW2 172 aaPredicted RBP8.14□□□□□ -1.11
VPS29-211ENST00000553128 CMTM2Q8TAZ6 248 aa8.14□□□□□ -1.11
VPS29-211ENST00000553128 NAP1L6A6NFF2 107 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 A8MWV9 139 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 GCGP01275 180 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 TMBIM6P55061 237 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 RPL19P84098 196 aaKnown RBP8.13□□□□□ -1.11
VPS29-211ENST00000553128 IL15RAQ13261 267 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 MPV17L2Q567V2 206 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 KRTAP26-1Q6PEX3 210 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 OR5C1Q8NGR4 320 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 OR2G3Q8NGZ4 309 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
VPS29-211ENST00000553128 MRPS26Q9BYN8 205 aaKnown RBP8.13□□□□□ -1.11
VPS29-211ENST00000553128 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 TAAR5O14804 337 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 CRPP02741 224 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 KCNIP4Q6PIL6 250 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 OR10G7Q8NGN6 311 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 SPACA4Q8TDM5 124 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 WDR61Q9GZS3 305 aaKnown RBP8.12□□□□□ -1.11
VPS29-211ENST00000553128 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
VPS29-211ENST00000553128 IGKV3D-20A0A0C4DH25 116 aa8.11□□□□□ -1.11
VPS29-211ENST00000553128 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
VPS29-211ENST00000553128 SLPIP03973 132 aa8.11□□□□□ -1.11
VPS29-211ENST00000553128 WDR73Q6P4I2 378 aa8.11□□□□□ -1.11
VPS29-211ENST00000553128 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
VPS29-211ENST00000553128 SEC22CQ9BRL7 303 aa8.11□□□□□ -1.11
VPS29-211ENST00000553128 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
VPS29-211ENST00000553128 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
VPS29-211ENST00000553128 FAM74A4Q5TZK3 123 aa8.1□□□□□ -1.11
VPS29-211ENST00000553128 PLAC8Q9NZF1 115 aa8.1□□□□□ -1.11
VPS29-211ENST00000553128 A0A087WWL8 130 aa8.09□□□□□ -1.11
VPS29-211ENST00000553128 UBE2D3P61077 147 aa8.09□□□□□ -1.11
VPS29-211ENST00000553128 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
VPS29-211ENST00000553128 UBE2D2P62837 147 aa8.09□□□□□ -1.11
VPS29-211ENST00000553128 TRIQKQ629K1 86 aa8.09□□□□□ -1.11
VPS29-211ENST00000553128 SDHCQ99643 169 aaPredicted RBP8.09□□□□□ -1.11
VPS29-211ENST00000553128 MUC21A0A0G2JKD1 596 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 MIAQ16674 131 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 FAM74A1Q5RGS3 127 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 RNF185Q96GF1 192 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 NDFIP1Q9BT67 221 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 OR5AC2Q9NZP5 309 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 PSG8Q9UQ74 426 aa8.08□□□□□ -1.12
VPS29-211ENST00000553128 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
VPS29-211ENST00000553128 TRBV6-8A0A0A6YYG3 113 aa8.07□□□□□ -1.12
VPS29-211ENST00000553128 S100A4P26447 101 aaKnown RBP8.07□□□□□ -1.12
VPS29-211ENST00000553128 TAS2R45P59539 299 aa8.07□□□□□ -1.12
VPS29-211ENST00000553128 ARL6IP6Q8N6S5 226 aa8.07□□□□□ -1.12
VPS29-211ENST00000553128 GTSF1Q8WW33 167 aa8.07□□□□□ -1.12
VPS29-211ENST00000553128 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
VPS29-211ENST00000553128 TRAV6A0A075B6T7 132 aa8.06□□□□□ -1.12
VPS29-211ENST00000553128 hDV102S1A0JD36 115 aa8.06□□□□□ -1.12
VPS29-211ENST00000553128 C17orf112F2Z3M2 114 aa8.06□□□□□ -1.12
VPS29-211ENST00000553128 H3BVH4 76 aa8.06□□□□□ -1.12
VPS29-211ENST00000553128 RHODO00212 210 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms