RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C5orf17Q8NAS9 161 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 CYTL1Q9NRR1 136 aa13.21□□□□□ -0.29
TNFRSF1B-204ENST00000536782 IGLV5-52A0A0A0MRZ9 124 aa13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 ZNF80P51504 273 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 C11orf21Q9P2W6 132 aa13.2□□□□□ -0.3
TNFRSF1B-204ENST00000536782 CTXND1A0A1B0GTU2 59 aa13.19□□□□□ -0.3
TNFRSF1B-204ENST00000536782 GCGP01275 180 aa13.19□□□□□ -0.3
TNFRSF1B-204ENST00000536782 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
TNFRSF1B-204ENST00000536782 DPPA3Q6W0C5 159 aa13.19□□□□□ -0.3
TNFRSF1B-204ENST00000536782 PSG8Q9UQ74 426 aa13.19□□□□□ -0.3
TNFRSF1B-204ENST00000536782 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
TNFRSF1B-204ENST00000536782 A0A0D9SG52 128 aa13.18□□□□□ -0.3
TNFRSF1B-204ENST00000536782 SMR3BP02814 79 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1B-204ENST00000536782 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
TNFRSF1B-204ENST00000536782 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
TNFRSF1B-204ENST00000536782 Q9HAA7 133 aa13.18□□□□□ -0.3
TNFRSF1B-204ENST00000536782 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 IGHV3-33P01772 117 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 IGHV3-30-3P0DP02 117 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 FLI1Q01543 452 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 SMUG1Q53HV7 270 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 ZNF506Q5JVG8 444 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 LELP1Q5T871 98 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 OR11H4Q8NGC9 324 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 PTH2Q96A98 100 aa13.17□□□□□ -0.3
TNFRSF1B-204ENST00000536782 PGPEP1LA6NFU8 196 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 IGLV2-11P01706 119 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 MGST1P10620 155 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 SUMO1P63165 101 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 ZNF726P1Q15940 193 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 PRNTQ86SH4 94 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 TMEM75Q8N9X5 138 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 ATP6V0E2Q8NHE4 81 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 TMEM70Q9BUB7 260 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 GTSF1LQ9H1H1 148 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 EPDR1Q9UM22 224 aa13.16□□□□□ -0.3
TNFRSF1B-204ENST00000536782 DNAH8Q96JB1 4490 aa13.15□□□□□ -0.3
TNFRSF1B-204ENST00000536782 A0A1W2PRE2 83 aa13.15□□□□□ -0.3
TNFRSF1B-204ENST00000536782 FAM229AH3BQW9 127 aa13.15□□□□□ -0.3
TNFRSF1B-204ENST00000536782 Q8N814 137 aa13.15□□□□□ -0.3
TNFRSF1B-204ENST00000536782 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
TNFRSF1B-204ENST00000536782 KANTRA0A1W2PQU2 76 aa13.14□□□□□ -0.31
TNFRSF1B-204ENST00000536782 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
TNFRSF1B-204ENST00000536782 BCL2L11O43521 198 aa13.14□□□□□ -0.31
TNFRSF1B-204ENST00000536782 RNASE3P12724 160 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1B-204ENST00000536782 HAMPP81172 84 aa13.14□□□□□ -0.31
TNFRSF1B-204ENST00000536782 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
TNFRSF1B-204ENST00000536782 SEC11BP0C7V7 166 aa13.12□□□□□ -0.31
TNFRSF1B-204ENST00000536782 EIF5AP63241 154 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1B-204ENST00000536782 LAGE3Q14657 143 aa13.12□□□□□ -0.31
TNFRSF1B-204ENST00000536782 TM2D2Q9BX73 214 aa13.12□□□□□ -0.31
TNFRSF1B-204ENST00000536782 ZNF471Q9BX82 626 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-204ENST00000536782 NKX6-2Q9C056 277 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-204ENST00000536782 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
TNFRSF1B-204ENST00000536782 ZFP2Q6ZN57 461 aa13.11□□□□□ -0.31
TNFRSF1B-204ENST00000536782 Q6ZNX1 250 aa13.11□□□□□ -0.31
TNFRSF1B-204ENST00000536782 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
TNFRSF1B-204ENST00000536782 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
TNFRSF1B-204ENST00000536782 PARLQ9H300 379 aa13.11□□□□□ -0.31
TNFRSF1B-204ENST00000536782 A8MWV9 139 aa13.1□□□□□ -0.31
TNFRSF1B-204ENST00000536782 UMAD1C9J7I0 102 aa13.1□□□□□ -0.31
TNFRSF1B-204ENST00000536782 S100A4P26447 101 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1B-204ENST00000536782 Q6ZSN1 163 aa13.1□□□□□ -0.31
TNFRSF1B-204ENST00000536782 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
TNFRSF1B-204ENST00000536782 IGKV3D-20A0A0C4DH25 116 aa13.09□□□□□ -0.31
TNFRSF1B-204ENST00000536782 FGF8P55075 233 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-204ENST00000536782 LGALSLQ3ZCW2 172 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-204ENST00000536782 PIK3CD-AS1Q5SR53 167 aa13.09□□□□□ -0.31
TNFRSF1B-204ENST00000536782 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
TNFRSF1B-204ENST00000536782 GAGE12JA6NER3 117 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 PFDN1O60925 122 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 ASIPP42127 132 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 GAGE1Q13065 139 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 GAGE4Q13068 117 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 GAGE5Q13069 117 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 GAGE13Q4V321 117 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 ARL2-SNX15V9GYD0 113 aa13.08□□□□□ -0.32
TNFRSF1B-204ENST00000536782 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 TRAV34A0A0B4J273 112 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 FAM74A7A6NL05 159 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 IFNA7P01567 189 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 C1QBP02746 253 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 Q8N3U1 123 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 FAM30AQ9NZY2 134 aa13.07□□□□□ -0.32
TNFRSF1B-204ENST00000536782 UBE2G2P60604 165 aa13.06□□□□□ -0.32
TNFRSF1B-204ENST00000536782 TOR2AQ5JU69 321 aa13.06□□□□□ -0.32
TNFRSF1B-204ENST00000536782 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
TNFRSF1B-204ENST00000536782 HIST1H2BAQ96A08 127 aa13.06□□□□□ -0.32
TNFRSF1B-204ENST00000536782 TCEAL7Q9BRU2 100 aa13.06□□□□□ -0.32
TNFRSF1B-204ENST00000536782 IL36BQ9NZH7 164 aa13.06□□□□□ -0.32
TNFRSF1B-204ENST00000536782 A0A087WWC5 75 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms