RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SLC25A2Q9BXI2 301 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 SLC39A9Q9NUM3 307 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 TIMM9Q9Y5J7 89 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 UBE2L5PA0A1B0GUS4 154 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 GNRH2O43555 120 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 ATP6V1G2O95670 118 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 GAGE1Q13065 139 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 GAGE4Q13068 117 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 GCSAMLQ5JQS6 135 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 Q6ZRG5 221 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 FAM167A-AS1Q96KT0 104 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 WDR83OSQ9Y284 106 aa5.12□□□□□ -1.59
USP48-212ENST00000527823 TRAV8-1A0A0A6YYK1 113 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 C7orf66A4D0T2 115 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 OR10J4P0C629 311 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 TAS2R30P59541 319 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 VWC2Q2TAL6 325 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 NIT1Q86X76 327 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 MCFD2Q8NI22 146 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 DIRAS2Q96HU8 199 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 LINC01600Q96MT4 127 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 OR51M1Q9H341 326 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 KLK12Q9UKR0 248 aa5.11□□□□□ -1.59
USP48-212ENST00000527823 F6UZH7 168 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 MGST1P10620 155 aaKnown RBP5.1□□□□□ -1.59
USP48-212ENST00000527823 FAUP35544 74 aaKnown RBP5.1□□□□□ -1.59
USP48-212ENST00000527823 RPL29P47914 159 aaKnown RBP5.1□□□□□ -1.59
USP48-212ENST00000527823 GAGE5Q13069 117 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 CIRBPQ14011 172 aaKnown RBP5.1□□□□□ -1.59
USP48-212ENST00000527823 SPCS2Q15005 226 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 C14orf177Q52M58 125 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 UBE2WQ96B02 151 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 FXYD5Q96DB9 178 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 GPN1Q9HCN4 374 aaPredicted RBP5.1□□□□□ -1.59
USP48-212ENST00000527823 Q9UF83 564 aa5.1□□□□□ -1.59
USP48-212ENST00000527823 A0A0D9SG52 128 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 A0A0J9YXV3 536 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 C9orf170A2RU37 121 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 RBAKDNA6NC62 111 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 CST7O76096 145 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 PRSS1P07477 247 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
USP48-212ENST00000527823 BAXQ07812 192 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 RAB31Q13636 194 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 IAH1Q2TAA2 248 aaPredicted RBP5.09□□□□□ -1.59
USP48-212ENST00000527823 ZNF876PQ49A33 203 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 ZNF506Q5JVG8 444 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 MIR17HGQ75NE6 70 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 C12orf45Q8N5I9 185 aaPredicted RBP5.09□□□□□ -1.59
USP48-212ENST00000527823 CYB561D1Q8N8Q1 229 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 C9orf163Q8N9P6 203 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 SLC25A21Q9BQT8 299 aaPredicted RBP5.09□□□□□ -1.59
USP48-212ENST00000527823 SDF2L1Q9HCN8 221 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 UQCC1Q9NVA1 299 aa5.09□□□□□ -1.59
USP48-212ENST00000527823 RABL2AQ9UBK7 228 aaPredicted RBP5.09□□□□□ -1.59
USP48-212ENST00000527823 RSL24D1Q9UHA3 163 aaKnown RBP5.09□□□□□ -1.59
USP48-212ENST00000527823 PHOX2AO14813 284 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 HLA-DQA1P01909 254 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 NBEAP1P0C6P0 100 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 SMIM18P0DKX4 95 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 INPP1P49441 399 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 FFAR4Q5NUL3 377 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 DYNC2LI1Q8TCX1 351 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 C9orf85Q96MD7 179 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 PARLQ9H300 379 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 C11orf1Q9H5F2 150 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 LENEPQ9Y5L5 61 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 KIF25-AS1Q9Y6Z4 181 aa5.08□□□□□ -1.6
USP48-212ENST00000527823 A0A087WWC5 75 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 TRAV21A0A0B4J279 112 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 CIDEAO60543 219 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 CHTF8P0CG12 524 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 FGF7P21781 194 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 SDIM1Q6ZPB5 146 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 TOMM5Q8N4H5 51 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 TMEM75Q8N9X5 138 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 HSD17B11Q8NBQ5 300 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 ASB13Q8WXK3 278 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 TVP23CQ96ET8 276 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 ZC2HC1AQ96GY0 325 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 C2orf50Q96LR7 162 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 LINC00479Q96M42 142 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 ATP5SQ99766 215 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 NPCDR1Q9BY65 106 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 SAMD10Q9BYL1 202 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 URGCP-MRPS24S4R325 110 aa5.07□□□□□ -1.6
USP48-212ENST00000527823 A0A087WYN8 130 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 IGSF23A1L1A6 192 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 FAM24AA6NFZ4 105 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 AP3S2P59780 193 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 PRR3P79522 188 aaKnown RBP5.06□□□□□ -1.6
USP48-212ENST00000527823 ENHOQ6UWT2 76 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 C14orf178Q8N769 122 aaPredicted RBP5.06□□□□□ -1.6
USP48-212ENST00000527823 SPACA4Q8TDM5 124 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 CHCHD7Q9BUK0 85 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 DPH3P1Q9H4G8 78 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 FLVCR2Q9UPI3 526 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms