RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 LYRM9A8MSI8 78 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 GNRH2O43555 120 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 SH2D1AO60880 128 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 TGP01266 2768 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 SPART-AS1P0CW21 52 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 TCL1AP56279 114 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 FAM74A3Q4VXF1 159 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 DNLZQ5SXM8 178 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 OCC1Q8TAD7 63 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 SDF2L1Q9HCN8 221 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 BIN3Q9NQY0 253 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 MDFICQ9P1T7 246 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 DKK2Q9UBU2 259 aa5.95□□□□□ -1.46
VPS13B-210ENST00000521932 IGHV3-16A0A0C4DH30 117 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 TEX48A0A1B0GUV7 120 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 C19orf71A6NCJ1 209 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 CXorf65A6NEN9 183 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 PGPEP1LA6NFU8 196 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 KRBOX1C9JBD0 128 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 K7EN84 100 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 TYMSP04818 313 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 CEBPGP53567 150 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 EMP1P54849 157 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 C11orf45Q8TAV5 145 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 SMIM7Q9BQ49 75 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 GSN-AS1Q9NRJ2 163 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 NAGKQ9UJ70 344 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 CELA1Q9UNI1 258 aa5.94□□□□□ -1.46
VPS13B-210ENST00000521932 LINC00862A6NCI5 91 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 ZNF727A8MUV8 499 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 SNURFLB1AK76 121 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 B4DEV8 164 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 SPINK4O60575 86 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 ORM1P02763 201 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 MGST1P10620 155 aaKnown RBP5.93□□□□□ -1.46
VPS13B-210ENST00000521932 RNASE3P12724 160 aaKnown RBP5.93□□□□□ -1.46
VPS13B-210ENST00000521932 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 TMEM241Q24JQ0 296 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 C12orf74Q32Q52 190 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 LGALS9BQ3B8N2 356 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 FAM222AQ5U5X8 452 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 PRR27Q6MZM9 219 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 UQCC3Q6UW78 93 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 LINC01551Q86U37 167 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 LINC00612Q8N6U2 182 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 C18orf15Q96N68 181 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 SPXQ9BT56 116 aa5.93□□□□□ -1.46
VPS13B-210ENST00000521932 NOP10Q9NPE3 64 aaKnown RBP5.93□□□□□ -1.46
VPS13B-210ENST00000521932 CXCL1P09341 107 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 OR5I1Q13606 314 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 SOHLH1Q5JUK2 328 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 FAM231DQ6ZW35 169 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 RASL10AQ92737 203 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 PTH2Q96A98 100 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 DAZAP1Q96EP5 407 aaKnown RBP5.92□□□□□ -1.46
VPS13B-210ENST00000521932 C9orf85Q96MD7 179 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 IL36BQ9NZH7 164 aa5.92□□□□□ -1.46
VPS13B-210ENST00000521932 M0R036 132 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 SFTA3P0C7M3 94 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 ASIPP42127 132 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 NANOS2P60321 138 aaKnown RBP5.91□□□□□ -1.46
VPS13B-210ENST00000521932 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 PIK3CD-AS1Q5SR53 167 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 MUC7Q8TAX7 377 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 NDUFAF3Q9BU61 184 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 SCRT2Q9NQ03 307 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 NAT8Q9UHE5 227 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 STAB2Q8WWQ8 2551 aa5.91□□□□□ -1.46
VPS13B-210ENST00000521932 TMEM218A2RU14 115 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 M0R2P5 195 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 P01737 135 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 ARMS2P0C7Q2 107 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 S100A4P26447 101 aaKnown RBP5.9□□□□□ -1.46
VPS13B-210ENST00000521932 DAD1P61803 113 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 RPL23P62829 140 aaKnown RBP5.9□□□□□ -1.46
VPS13B-210ENST00000521932 RPL19P84098 196 aaKnown RBP5.9□□□□□ -1.46
VPS13B-210ENST00000521932 Q6ZTC4 211 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 Q6ZTI0 123 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 COMMD7Q86VX2 200 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 ISOC2Q96AB3 205 aa5.9□□□□□ -1.46
VPS13B-210ENST00000521932 RNASE7Q9H1E1 156 aaKnown RBP5.9□□□□□ -1.46
VPS13B-210ENST00000521932 TMSB15BA0A087X1C1 80 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 XKRY2A2RUG3 117 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 GRIFINA4D1Z8 144 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 C3orf84H3BNL1 204 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 SNAI2O43623 268 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 GAGE7O76087 117 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 OR5AL1P0C617 328 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 GAGE12FP0CL80 117 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 GAGE12GP0CL81 117 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 GAGE12IP0CL82 117 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 DEFB130BP0DP73 79 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 DEFB130AP0DP74 79 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 FOXA3P55318 350 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-210ENST00000521932 ERVFC1-1P60608 527 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 RPS20P60866 119 aaKnown RBP5.89□□□□□ -1.47
VPS13B-210ENST00000521932 ZNF876PQ49A33 203 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 OR2D3Q8NGH3 330 aa5.89□□□□□ -1.47
VPS13B-210ENST00000521932 PHLDA1Q8WV24 401 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms