RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HLA-DRB4P13762 266 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 G6PCP35575 357 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 SNCAP37840 140 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 BRWD1-AS2P59051 145 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 WT1-ASQ06250 92 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 FABP9Q0Z7S8 132 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 OR5I1Q13606 314 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 RRN3P1Q2M238 152 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 OR10J3Q5JRS4 329 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 PSMG4Q5JS54 123 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 SPANXN5Q5MJ07 72 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 TMEM78Q5T7P6 136 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 TMEM14EPQ6UXP3 125 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 Q6ZRG5 221 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 OR10P1Q8NGE3 313 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 METTL26Q96S19 204 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 TMEM70Q9BUB7 260 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 RBKSQ9H477 322 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 NDUFA4L2Q9NRX3 87 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 MRPL16Q9NX20 251 aaKnown RBP3.4□□□□□ -1.87
SDCBP-207ENST00000520168 FKBP11Q9NYL4 201 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 MDFICQ9P1T7 246 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 PSG8Q9UQ74 426 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 HLA-DRB4X5D2U9 266 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
SDCBP-207ENST00000520168 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 CEBPZOSA8MTT3 80 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 H3BMM0 161 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 K7EN84 100 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 SMR3BP02814 79 aaPredicted RBP3.39□□□□□ -1.87
SDCBP-207ENST00000520168 ATP5G1P05496 136 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 IAPPP10997 89 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 CRYBB3P26998 211 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 ATP5G3P48201 142 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 SLC38A11Q08AI6 406 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 IZUMO4Q1ZYL8 232 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 SPATA31B1PQ5VZV4 182 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 GTF2H5Q6ZYL4 71 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 NFE4Q86UQ8 179 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 ZNF114Q8NC26 417 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 FAM213BQ8TBF2 198 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 MBD3L1Q8WWY6 194 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 GPR82Q96P67 336 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 TMEM147Q9BVK8 224 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 SNHG12Q9BXW3 62 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 EIF5A2Q9GZV4 153 aaKnown RBP3.39□□□□□ -1.87
SDCBP-207ENST00000520168 SLC35B3Q9H1N7 401 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 SH3BGRL3Q9H299 93 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 FNDC4Q9H6D8 234 aaPredicted RBP3.39□□□□□ -1.87
SDCBP-207ENST00000520168 YTHDF2Q9Y5A9 579 aaKnown RBP3.39□□□□□ -1.87
SDCBP-207ENST00000520168 TIMM9Q9Y5J7 89 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 OR51B2Q9Y5P1 312 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
SDCBP-207ENST00000520168 IGHV3OR16-12A0A075B7B8 117 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 TEX50A0A1B0GTY4 177 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 A0A1B0GV50 99 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 RBFOX3A6NFN3 312 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 B5MCH6 92 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 FNDC10F2Z333 226 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 C17orf112F2Z3M2 114 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 I3L2K1 104 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 M0R2Z0 102 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 AGPAT2O15120 278 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 APOHP02749 345 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-207ENST00000520168 SFTA3P0C7M3 94 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 ESDP10768 282 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-207ENST00000520168 LEPP41159 167 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 LINC00315P59091 139 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 HSPE1P61604 102 aaKnown RBP3.38□□□□□ -1.87
SDCBP-207ENST00000520168 ARL16Q0P5N6 197 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 KHDC3LQ587J8 217 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-207ENST00000520168 FAM19A5Q7Z5A7 132 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-207ENST00000520168 ZNF709Q8N972 641 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 MLST8Q9BVC4 326 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 KRTAP1-5Q9BYS1 174 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 WDR61Q9GZS3 305 aaKnown RBP3.38□□□□□ -1.87
SDCBP-207ENST00000520168 SLC39A9Q9NUM3 307 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 NAT8Q9UHE5 227 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 PRNDQ9UKY0 176 aa3.38□□□□□ -1.87
SDCBP-207ENST00000520168 TRAV3A0A0B4J244 114 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 A0A1B0GX51 115 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 PMS2P5A8MQ11 134 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 C9JQL5 133 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 INS-IGF2F8WCM5 200 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 H3BP45 60 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 J3KT08 172 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 NXPH3O95157 252 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 GCGP01275 180 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 MT-ND4LP03901 98 aa3.37□□□□□ -1.87
SDCBP-207ENST00000520168 EVI2AP22794 236 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms