RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 BUB3O43684 328 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 IGHV3-30P01768 117 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 IGHV3-30-5P0DP03 117 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 COX7A1P24310 79 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 C22orf34Q6ZV56 151 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
SCLT1-208ENST00000506368 NDUFV3P56181 108 aaKnown RBP12.15□□□□□ -0.46
SCLT1-208ENST00000506368 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
SCLT1-208ENST00000506368 PLEKHB2Q96CS7 222 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 C11orf21Q9P2W6 132 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 POLEQ07864 2286 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 KLK9Q2XQG4 91 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 TTC32Q5I0X7 151 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 TMEM141Q96I45 108 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 KLK9Q9UKQ9 250 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 CADP27708 2225 aa12.15□□□□□ -0.46
SCLT1-208ENST00000506368 PCNX1Q96RV3 2341 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 C11orf86A6NJI1 115 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 PRAC2D3DTV9 90 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 CFC1BP0CG36 223 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 CFC1P0CG37 223 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 IFITM1P13164 125 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 B5MCH6 92 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 H3BVH4 76 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 GATA3P23771 443 aa12.14□□□□□ -0.47
SCLT1-208ENST00000506368 RPL13AP40429 203 aaKnown RBP12.14□□□□□ -0.47
SCLT1-208ENST00000506368 FLNCQ14315 2725 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
SCLT1-208ENST00000506368 GNLYP22749 145 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 IGFL4Q6B9Z1 124 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 ONECUT1Q9UBC0 465 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 S4R3C0 116 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
SCLT1-208ENST00000506368 TRAV8-2A0A0B4J237 113 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 OOSP1A8MZH6 123 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 PMVKQ15126 192 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 FAM57AQ8TBR7 257 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 KLK15Q9H2R5 256 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 ZFAND3Q9H8U3 227 aa12.12□□□□□ -0.47
SCLT1-208ENST00000506368 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
SCLT1-208ENST00000506368 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
SCLT1-208ENST00000506368 TIMM17AQ99595 171 aa12.11□□□□□ -0.47
SCLT1-208ENST00000506368 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
SCLT1-208ENST00000506368 SPANXDQ9BXN6 97 aa12.1□□□□□ -0.47
SCLT1-208ENST00000506368 ADGRG4Q8IZF6 3080 aa12.1□□□□□ -0.47
SCLT1-208ENST00000506368 IGLV4-69A0A075B6H9 119 aa12.1□□□□□ -0.47
SCLT1-208ENST00000506368 B9A039 149 aa12.1□□□□□ -0.47
SCLT1-208ENST00000506368 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
SCLT1-208ENST00000506368 C9JAW5 83 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 CRYGDP07320 174 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 MYO18BQ8IUG5 2567 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 TRAV21A0A0B4J279 112 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 FAM90A27PA6NNH2 459 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 M0R1W7 72 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 HES1Q14469 280 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 LINC00477Q96M19 166 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 KIR2DL4Q99706 377 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 TENM4Q6N022 2769 aa12.09□□□□□ -0.47
SCLT1-208ENST00000506368 EBI3Q14213 229 aa12.08□□□□□ -0.48
SCLT1-208ENST00000506368 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
SCLT1-208ENST00000506368 RNF182Q8N6D2 247 aa12.08□□□□□ -0.48
SCLT1-208ENST00000506368 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
SCLT1-208ENST00000506368 FAM110DQ8TAY7 271 aaPredicted RBP12.08□□□□□ -0.48
SCLT1-208ENST00000506368 UBR5O95071 2799 aaPredicted RBP12.07□□□□□ -0.48
SCLT1-208ENST00000506368 IGHV4OR15-8A0A075B7B6 117 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 A0A087WW49 117 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 IGIPA6NJ69 53 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 ODF3BA8MYP8 253 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 C9orf139Q6ZV77 190 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 Q8N6K4 173 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 TRAV8-4A0A0B4J246 113 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 LGALS3P17931 250 aaKnown RBP12.07□□□□□ -0.48
SCLT1-208ENST00000506368 DLX1P56177 255 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 METTL26Q96S19 204 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 PHLDA3Q9Y5J5 127 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 PLCE1Q9P212 2302 aa12.07□□□□□ -0.48
SCLT1-208ENST00000506368 Q8N1Y9 231 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 UTP20O75691 2785 aaKnown RBP12.06□□□□□ -0.48
SCLT1-208ENST00000506368 A0A0J9YX75 114 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 TRBV10-2A0A0K0K1G8 114 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 FAM240AA0A1B0GVK7 77 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 J3QQQ9 107 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 CCL21O00585 134 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
SCLT1-208ENST00000506368 NDPQ00604 133 aa12.06□□□□□ -0.48
SCLT1-208ENST00000506368 TMEM263Q8WUH6 116 aaKnown RBP12.06□□□□□ -0.48
SCLT1-208ENST00000506368 TRBV30A0A0K0K1B3 111 aa12.05□□□□□ -0.48
SCLT1-208ENST00000506368 IGHV3-23P01764 117 aa12.05□□□□□ -0.48
SCLT1-208ENST00000506368 PRTN3P24158 256 aa12.05□□□□□ -0.48
SCLT1-208ENST00000506368 LINC01620Q4KN68 170 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms