RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CSN1S1P47710 185 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 ZFP2Q6ZN57 461 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 OR10G7Q8NGN6 311 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 C15orf40Q8WUR7 153 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 SLC25A2Q9BXI2 301 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
LSM6-204ENST00000504181 NDUFS6O75380 124 aaKnown RBP7.63□□□□□ -1.19
LSM6-204ENST00000504181 MZT2AQ6P582 158 aa7.63□□□□□ -1.19
LSM6-204ENST00000504181 JPT2Q9H910 190 aa7.63□□□□□ -1.19
LSM6-204ENST00000504181 MCUBQ9NWR8 336 aa7.63□□□□□ -1.19
LSM6-204ENST00000504181 IGLV10-54A0A075B6I4 117 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 IFNA7P01567 189 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 NCS1P62166 190 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 TMEM128Q5BJH2 165 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 DYNC2LI1Q8TCX1 351 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 SMIM4Q8WVI0 70 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 GGACTQ9BVM4 153 aa7.62□□□□□ -1.19
LSM6-204ENST00000504181 FAM24AA6NFZ4 105 aa7.61□□□□□ -1.19
LSM6-204ENST00000504181 A8MWV9 139 aa7.61□□□□□ -1.19
LSM6-204ENST00000504181 TSC22D2O75157 780 aa7.61□□□□□ -1.19
LSM6-204ENST00000504181 SCGB1D2O95969 90 aa7.61□□□□□ -1.19
LSM6-204ENST00000504181 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
LSM6-204ENST00000504181 LGALSLQ3ZCW2 172 aaPredicted RBP7.61□□□□□ -1.19
LSM6-204ENST00000504181 PTH2Q96A98 100 aa7.61□□□□□ -1.19
LSM6-204ENST00000504181 C11orf21Q9P2W6 132 aa7.61□□□□□ -1.19
LSM6-204ENST00000504181 A0A096LNI7 61 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 RPL29P47914 159 aaKnown RBP7.6□□□□□ -1.19
LSM6-204ENST00000504181 VBP1P61758 197 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 MRPS10P82664 201 aaKnown RBP7.6□□□□□ -1.19
LSM6-204ENST00000504181 GCSAMLQ5JQS6 135 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 UFSP1Q6NVU6 142 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 LINC00269Q8N2A0 174 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 FAM167A-AS1Q96KT0 104 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 PRR34Q9NV39 138 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 RAB26Q9ULW5 256 aa7.6□□□□□ -1.19
LSM6-204ENST00000504181 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 ANKRD20A5PA0PJZ0 165 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 SFT2D2O95562 160 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 RNASE3P12724 160 aaKnown RBP7.59□□□□□ -1.19
LSM6-204ENST00000504181 RANP62826 216 aaKnown RBP7.59□□□□□ -1.19
LSM6-204ENST00000504181 PPP1R1AQ13522 171 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 MIR17HGQ75NE6 70 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 INO80EQ8NBZ0 244 aaPredicted RBP7.59□□□□□ -1.19
LSM6-204ENST00000504181 TMED6Q8WW62 240 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
LSM6-204ENST00000504181 RABL2AQ9UBK7 228 aaPredicted RBP7.59□□□□□ -1.19
LSM6-204ENST00000504181 BAXQ07812 192 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 FXYD5Q96DB9 178 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 HYLS1Q96M11 299 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 BCL7BQ9BQE9 202 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 VCX3BQ9H321 246 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 TREM1Q9NP99 234 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 WDR83OSQ9Y284 106 aa7.58□□□□□ -1.2
LSM6-204ENST00000504181 UBE2L5PA0A1B0GUS4 154 aa7.57□□□□□ -1.2
LSM6-204ENST00000504181 PTTG1O95997 202 aa7.57□□□□□ -1.2
LSM6-204ENST00000504181 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
LSM6-204ENST00000504181 LINC01547P58512 204 aaPredicted RBP7.57□□□□□ -1.2
LSM6-204ENST00000504181 UBE2D3P61077 147 aa7.57□□□□□ -1.2
LSM6-204ENST00000504181 UBE2D2P62837 147 aa7.57□□□□□ -1.2
LSM6-204ENST00000504181 FAM74A4Q5TZK3 123 aa7.57□□□□□ -1.2
LSM6-204ENST00000504181 MIXL1Q9H2W2 232 aa7.57□□□□□ -1.2
LSM6-204ENST00000504181 RAB5CP51148 216 aa7.56□□□□□ -1.2
LSM6-204ENST00000504181 TAS2R30P59541 319 aa7.56□□□□□ -1.2
LSM6-204ENST00000504181 RPL36AP83881 106 aaKnown RBP7.56□□□□□ -1.2
LSM6-204ENST00000504181 AP3S1Q92572 193 aa7.56□□□□□ -1.2
LSM6-204ENST00000504181 RPL36ALQ969Q0 106 aaKnown RBP7.56□□□□□ -1.2
LSM6-204ENST00000504181 C7orf66A4D0T2 115 aa7.55□□□□□ -1.2
LSM6-204ENST00000504181 ZNF80P51504 273 aaPredicted RBP7.55□□□□□ -1.2
LSM6-204ENST00000504181 RBX1P62877 108 aa7.55□□□□□ -1.2
LSM6-204ENST00000504181 DIRAS2Q96HU8 199 aa7.55□□□□□ -1.2
LSM6-204ENST00000504181 NMES1Q9C002 83 aa7.55□□□□□ -1.2
LSM6-204ENST00000504181 UQCC1Q9NVA1 299 aa7.55□□□□□ -1.2
LSM6-204ENST00000504181 TRBV7-3A0A075B6L6 115 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 RHODO00212 210 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
LSM6-204ENST00000504181 CST7O76096 145 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 S100A10P60903 97 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 PKIAP61925 76 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 REG3AQ06141 175 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 IL18Q14116 193 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 GOLT1AQ6ZVE7 132 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 GFRA4Q9GZZ7 299 aa7.54□□□□□ -1.2
LSM6-204ENST00000504181 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
LSM6-204ENST00000504181 RGS5O15539 181 aa7.53□□□□□ -1.2
LSM6-204ENST00000504181 OR7C2O60412 319 aa7.53□□□□□ -1.2
LSM6-204ENST00000504181 FGF7P21781 194 aa7.53□□□□□ -1.2
LSM6-204ENST00000504181 GAGE6Q13070 117 aa7.53□□□□□ -1.2
LSM6-204ENST00000504181 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
LSM6-204ENST00000504181 SLIRPQ9GZT3 109 aaKnown RBP7.53□□□□□ -1.2
LSM6-204ENST00000504181 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
LSM6-204ENST00000504181 TSPAN13O95857 204 aa7.52□□□□□ -1.21
LSM6-204ENST00000504181 MT-ND6P03923 174 aa7.52□□□□□ -1.21
LSM6-204ENST00000504181 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
LSM6-204ENST00000504181 BCAP31P51572 246 aa7.52□□□□□ -1.21
LSM6-204ENST00000504181 UBE2L3P68036 154 aaKnown RBP7.52□□□□□ -1.21
LSM6-204ENST00000504181 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
LSM6-204ENST00000504181 FER1L6-AS1Q8NA97 138 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms