RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 C14orf178Q8N769 122 aaPredicted RBP4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 OR10G7Q8NGN6 311 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 RAB24Q969Q5 203 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 PARLQ9H300 379 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 CCDC59Q9P031 241 aaKnown RBP4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 COMMD3Q9UBI1 195 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 TIMM9Q9Y5J7 89 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 LENEPQ9Y5L5 61 aa4.27□□□□□ -1.73
PDLIM1-203ENST00000490391 A0A096LNI7 61 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 FAM24AA6NFZ4 105 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 DIRC3C9JPN6 131 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 NDUFS6O75380 124 aaKnown RBP4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 ARL16Q0P5N6 197 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 KCNIP4Q6PIL6 250 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 OR2T35Q8NGX2 323 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 PTH2Q96A98 100 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 C9orf85Q96MD7 179 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 ATP5SQ99766 215 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 AAMDCQ9H7C9 122 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 SDF2L1Q9HCN8 221 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 RABL2BQ9UNT1 228 aa4.26□□□□□ -1.73
PDLIM1-203ENST00000490391 IGLV10-54A0A075B6I4 117 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 RBAKDNA6NC62 111 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 DISC1C4P0D8 188 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 HPGDSO60760 199 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 ANGP03950 147 aaKnown RBP4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 METTL15P1P0C7V9 234 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 MIC13Q5XKP0 118 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 INO80EQ8NBZ0 244 aaPredicted RBP4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 ASB13Q8WXK3 278 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 SLC39A9Q9NUM3 307 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 MGAT4CQ9UBM8 478 aa4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
PDLIM1-203ENST00000490391 IGLV1-50A0A075B6I6 118 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 TRAV21A0A0B4J279 112 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 TMEM262E9PQX1 116 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 IFNA7P01567 189 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 ANXA3P12429 323 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 RNASE3P12724 160 aaKnown RBP4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 CAMLGP49069 296 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 CLPSL2Q6UWE3 100 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 OR1L4Q8NGR5 311 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 PHYHIPLQ96FC7 376 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 KCNS1Q96KK3 526 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 FAM167A-AS1Q96KT0 104 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 PFDN5Q99471 154 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 PRRT1Q99946 306 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 PSENENQ9NZ42 101 aa4.24□□□□□ -1.73
PDLIM1-203ENST00000490391 A0A087WWL8 130 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 PIGBOS1A0A0B4J2F0 54 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 UBE2D3P61077 147 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 UBE2D2P62837 147 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 SSBP1Q04837 148 aaKnown RBP4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 Q6ZRG5 221 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 LINC00269Q8N2A0 174 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 C15orf56Q8N910 161 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 OR2G3Q8NGZ4 309 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 TMED6Q8WW62 240 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 TRIM63Q969Q1 353 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 TVP23CQ96ET8 276 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 SMIM8Q96KF7 97 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 CNBD2Q96M20 576 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 JPT2Q9H910 190 aa4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 GPN1Q9HCN4 374 aaPredicted RBP4.23□□□□□ -1.73
PDLIM1-203ENST00000490391 TRBV6-8A0A0A6YYG3 113 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 A8MWV9 139 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 SSSCA1O60232 199 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 NBEAP1P0C6P0 100 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 AKAIN1P0CW23 69 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 RPS10P46783 165 aaKnown RBP4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 NRARPQ7Z6K4 114 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 CLVS1Q8IUQ0 354 aaPredicted RBP4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 C12orf45Q8N5I9 185 aaPredicted RBP4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 GGACTQ9BVM4 153 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 SLC25A2Q9BXI2 301 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 GFRA4Q9GZZ7 299 aa4.22□□□□□ -1.73
PDLIM1-203ENST00000490391 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 F6UZH7 168 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 H0Y9J4 135 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 RPL29P47914 159 aaKnown RBP4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 LSM3P62310 102 aaKnown RBP4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 RBX1P62877 108 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 GCSAMLQ5JQS6 135 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 FER1L6-AS1Q8NA97 138 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 FXYD5Q96DB9 178 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
PDLIM1-203ENST00000490391 FAM25AB3EWG3 89 aa4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 FAM25CB3EWG5 89 aa4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 FAM25GB3EWG6 89 aa4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 TSC22D2O75157 780 aa4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 CSN1S1P47710 185 aa4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 TPRXLQ17RH7 258 aa4.2□□□□□ -1.74
PDLIM1-203ENST00000490391 TMEM128Q5BJH2 165 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms