RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 ZNF506Q5JVG8 444 aa17.38■□□□□ 0.37
RNF220-216ENST00000488865 PRNTQ86SH4 94 aa17.38■□□□□ 0.37
RNF220-216ENST00000488865 CYB561D1Q8N8Q1 229 aa17.38■□□□□ 0.37
RNF220-216ENST00000488865 TMEM75Q8N9X5 138 aa17.38■□□□□ 0.37
RNF220-216ENST00000488865 ALG5Q9Y673 324 aa17.38■□□□□ 0.37
RNF220-216ENST00000488865 GGTLC3B5MD39 225 aa17.37■□□□□ 0.37
RNF220-216ENST00000488865 CXorf1O96002 111 aa17.37■□□□□ 0.37
RNF220-216ENST00000488865 SAPCD1Q5SSQ6 148 aa17.37■□□□□ 0.37
RNF220-216ENST00000488865 ATP6V0E2Q8NHE4 81 aa17.37■□□□□ 0.37
RNF220-216ENST00000488865 Q8N814 137 aa17.36■□□□□ 0.37
RNF220-216ENST00000488865 Q9HAA7 133 aa17.36■□□□□ 0.37
RNF220-216ENST00000488865 TNFSF18Q9UNG2 199 aa17.36■□□□□ 0.37
RNF220-216ENST00000488865 DMBT1Q9UGM3 2413 aaPredicted RBP17.36■□□□□ 0.37
RNF220-216ENST00000488865 IGHV3-30P01768 117 aa17.35■□□□□ 0.37
RNF220-216ENST00000488865 IGHV3-33P01772 117 aa17.35■□□□□ 0.37
RNF220-216ENST00000488865 SMR3BP02814 79 aaPredicted RBP17.35■□□□□ 0.37
RNF220-216ENST00000488865 IGHV3-30-3P0DP02 117 aa17.35■□□□□ 0.37
RNF220-216ENST00000488865 IGHV3-30-5P0DP03 117 aa17.35■□□□□ 0.37
RNF220-216ENST00000488865 LAGE3Q14657 143 aa17.35■□□□□ 0.37
RNF220-216ENST00000488865 ACTR3CQ9C0K3 210 aaPredicted RBP17.35■□□□□ 0.37
RNF220-216ENST00000488865 PIK3CD-AS1Q5SR53 167 aa17.34■□□□□ 0.37
RNF220-216ENST00000488865 SH3BGRL3Q9H299 93 aa17.34■□□□□ 0.37
RNF220-216ENST00000488865 SRRM2Q9UQ35 2752 aaKnown RBP17.34■□□□□ 0.37
RNF220-216ENST00000488865 FAM229AH3BQW9 127 aa17.33■□□□□ 0.36
RNF220-216ENST00000488865 ZFP2Q6ZN57 461 aa17.33■□□□□ 0.36
RNF220-216ENST00000488865 A0A1W2PRE2 83 aa17.32■□□□□ 0.36
RNF220-216ENST00000488865 A8MWV9 139 aa17.32■□□□□ 0.36
RNF220-216ENST00000488865 TM2D2Q9BX73 214 aa17.32■□□□□ 0.36
RNF220-216ENST00000488865 PARLQ9H300 379 aa17.32■□□□□ 0.36
RNF220-216ENST00000488865 Q6ZSN1 163 aa17.31■□□□□ 0.36
RNF220-216ENST00000488865 MYCBP2O75592 4640 aa17.3■□□□□ 0.36
RNF220-216ENST00000488865 IGKV3D-20A0A0C4DH25 116 aa17.3■□□□□ 0.36
RNF220-216ENST00000488865 S100A4P26447 101 aaKnown RBP17.3■□□□□ 0.36
RNF220-216ENST00000488865 MED28Q9H204 178 aa17.3■□□□□ 0.36
RNF220-216ENST00000488865 FABP5P3A8MUU1 101 aa17.29■□□□□ 0.36
RNF220-216ENST00000488865 LINC00694P0DN24 101 aa17.29■□□□□ 0.36
RNF220-216ENST00000488865 HAMPP81172 84 aa17.29■□□□□ 0.36
RNF220-216ENST00000488865 LINC00479Q96M42 142 aa17.29■□□□□ 0.36
RNF220-216ENST00000488865 C1QBP02746 253 aa17.28■□□□□ 0.36
RNF220-216ENST00000488865 ARL2-SNX15V9GYD0 113 aa17.28■□□□□ 0.36
RNF220-216ENST00000488865 TRAV34A0A0B4J273 112 aa17.27■□□□□ 0.36
RNF220-216ENST00000488865 ASIPP42127 132 aa17.27■□□□□ 0.36
RNF220-216ENST00000488865 LGALSLQ3ZCW2 172 aaPredicted RBP17.27■□□□□ 0.36
RNF220-216ENST00000488865 IL36BQ9NZH7 164 aa17.27■□□□□ 0.36
RNF220-216ENST00000488865 TRAV8-3A0A0A6YYJ7 113 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 GAGE12JA6NER3 117 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 GAGE1Q13065 139 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 GAGE4Q13068 117 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 GAGE5Q13069 117 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 GAGE13Q4V321 117 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 Q5BKY6 102 aa17.26■□□□□ 0.35
RNF220-216ENST00000488865 INO80EQ8NBZ0 244 aaPredicted RBP17.26■□□□□ 0.35
RNF220-216ENST00000488865 A0A087WWC5 75 aa17.25■□□□□ 0.35
RNF220-216ENST00000488865 PTTG1O95997 202 aa17.25■□□□□ 0.35
RNF220-216ENST00000488865 IFNA7P01567 189 aa17.25■□□□□ 0.35
RNF220-216ENST00000488865 FGF8P55075 233 aaPredicted RBP17.25■□□□□ 0.35
RNF220-216ENST00000488865 UFSP1Q6NVU6 142 aa17.25■□□□□ 0.35
RNF220-216ENST00000488865 Q8N3U1 123 aa17.25■□□□□ 0.35
RNF220-216ENST00000488865 NKX6-2Q9C056 277 aaPredicted RBP17.25■□□□□ 0.35
RNF220-216ENST00000488865 FAM30AQ9NZY2 134 aa17.25■□□□□ 0.35
RNF220-216ENST00000488865 BORCS7-ASMTA0A0B4J1R7 106 aa17.24■□□□□ 0.35
RNF220-216ENST00000488865 CTXND1A0A1B0GTU2 59 aa17.24■□□□□ 0.35
RNF220-216ENST00000488865 GIPP09681 153 aaPredicted RBP17.24■□□□□ 0.35
RNF220-216ENST00000488865 ZNF726P1Q15940 193 aa17.24■□□□□ 0.35
RNF220-216ENST00000488865 TOR2AQ5JU69 321 aa17.24■□□□□ 0.35
RNF220-216ENST00000488865 RPL7L1Q6DKI1 246 aaKnown RBP17.24■□□□□ 0.35
RNF220-216ENST00000488865 OR2T35Q8NGX2 323 aa17.24■□□□□ 0.35
RNF220-216ENST00000488865 FLG2Q5D862 2391 aaPredicted RBP17.24■□□□□ 0.35
RNF220-216ENST00000488865 DNAH8Q96JB1 4490 aa17.24■□□□□ 0.35
RNF220-216ENST00000488865 PEX7O00628 323 aa17.23■□□□□ 0.35
RNF220-216ENST00000488865 DNLZQ5SXM8 178 aa17.23■□□□□ 0.35
RNF220-216ENST00000488865 Q86TA4 180 aa17.23■□□□□ 0.35
RNF220-216ENST00000488865 HIST1H2BAQ96A08 127 aa17.23■□□□□ 0.35
RNF220-216ENST00000488865 RNF222A6NCQ9 220 aa17.22■□□□□ 0.35
RNF220-216ENST00000488865 B4DEV8 164 aa17.22■□□□□ 0.35
RNF220-216ENST00000488865 SAMD10Q9BYL1 202 aa17.22■□□□□ 0.35
RNF220-216ENST00000488865 JPT2Q9H910 190 aa17.22■□□□□ 0.35
RNF220-216ENST00000488865 Q9UF83 564 aa17.22■□□□□ 0.35
RNF220-216ENST00000488865 RHODO00212 210 aa17.21■□□□□ 0.35
RNF220-216ENST00000488865 UBE2G2P60604 165 aa17.21■□□□□ 0.35
RNF220-216ENST00000488865 WFDC2Q14508 124 aa17.21■□□□□ 0.35
RNF220-216ENST00000488865 DMRTA1Q5VZB9 504 aa17.21■□□□□ 0.35
RNF220-216ENST00000488865 COX8CQ7Z4L0 72 aa17.21■□□□□ 0.35
RNF220-216ENST00000488865 DAZ4Q86SG3 579 aaKnown RBP17.21■□□□□ 0.35
RNF220-216ENST00000488865 C14orf178Q8N769 122 aaPredicted RBP17.21■□□□□ 0.35
RNF220-216ENST00000488865 SYT8Q8NBV8 401 aa17.21■□□□□ 0.35
RNF220-216ENST00000488865 DAZ3Q9NR90 486 aaKnown RBP17.21■□□□□ 0.35
RNF220-216ENST00000488865 FAM74A7A6NL05 159 aa17.2■□□□□ 0.34
RNF220-216ENST00000488865 H3BVH4 76 aa17.2■□□□□ 0.34
RNF220-216ENST00000488865 COX11Q9Y6N1 276 aa17.2■□□□□ 0.34
RNF220-216ENST00000488865 KRBOX1C9JBD0 128 aa17.19■□□□□ 0.34
RNF220-216ENST00000488865 ARMS2P0C7Q2 107 aa17.19■□□□□ 0.34
RNF220-216ENST00000488865 CRIP1P50238 77 aa17.19■□□□□ 0.34
RNF220-216ENST00000488865 ZC2HC1AQ96GY0 325 aa17.19■□□□□ 0.34
RNF220-216ENST00000488865 BATF3Q9NR55 127 aa17.19■□□□□ 0.34
RNF220-216ENST00000488865 ZFP30Q9Y2G7 519 aa17.19■□□□□ 0.34
RNF220-216ENST00000488865 FXYD6-FXYD2A0A087WZ82 144 aa17.18■□□□□ 0.34
RNF220-216ENST00000488865 Q6ZSA8 131 aa17.18■□□□□ 0.34
RNF220-216ENST00000488865 OR11H4Q8NGC9 324 aa17.18■□□□□ 0.34
RNF220-216ENST00000488865 AKR1C8PQ5T2L2 129 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms