RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 AIPO00170 330 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 NPPCP23582 126 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 KRTAP10-4P60372 401 aaPredicted RBP2.04□□□□□ -2.08
SMC6-208ENST00000481708 GLT8D1Q68CQ7 371 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 AMMECR1LQ6DCA0 310 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 PHF5AQ7RTV0 110 aaKnown RBP2.04□□□□□ -2.08
SMC6-208ENST00000481708 OR8I2Q8N0Y5 310 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 SPANXA2-OT1Q8N9U9 137 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 BRK1Q8WUW1 75 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 NACAE9PAV3 2078 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 BORCS7-ASMTA0A0B4J1R7 106 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 LY6HO94772 140 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 NAPSAO96009 420 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 IFNA7P01567 189 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 IGHV1-46P01743 117 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 TCRAP04437 139 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 ZNF19P17023 458 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 ZNF22P17026 224 aaPredicted RBP2.03□□□□□ -2.08
SMC6-208ENST00000481708 HOXB6P17509 224 aaKnown RBP2.03□□□□□ -2.08
SMC6-208ENST00000481708 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 FER1L6-AS1Q8NA97 138 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 OR2T10Q8NGZ9 312 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 C1orf54Q8WWF1 131 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 BAIAP2Q9UQB8 552 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 FREM3P0C091 2139 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 CCL25O15444 150 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 STATHP02808 62 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 ELK1P19419 428 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 RHOGP84095 191 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 TAF9Q16594 264 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 BPIFA4PQ86YQ2 179 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 LINC00311Q8N616 119 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 BCL2L10Q9HD36 194 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 MRPL16Q9NX20 251 aaKnown RBP2.03□□□□□ -2.08
SMC6-208ENST00000481708 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 ZNF443Q9Y2A4 671 aaPredicted RBP2.03□□□□□ -2.08
SMC6-208ENST00000481708 PRR14LQ5THK1 2151 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 A0A0B4J2C4 111 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 SHBGP04278 402 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 CRHBPP24387 322 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 FOXA3P55318 350 aaPredicted RBP2.03□□□□□ -2.08
SMC6-208ENST00000481708 MRGPRG-AS1Q2M3A8 158 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 C1orf140Q5VVS0 124 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 IMUPQ9GZP8 106 aa2.03□□□□□ -2.08
SMC6-208ENST00000481708 MARCOQ9UEW3 520 aaPredicted RBP2.03□□□□□ -2.08
SMC6-208ENST00000481708 FREM1Q5H8C1 2179 aa2.03□□□□□ -2.09
SMC6-208ENST00000481708 TRAV38-1A0A0B4J264 116 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 CCDC179H3BU77 68 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 LYZL6O75951 148 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 AQP4P55087 323 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 TNFRSF19Q9NS68 423 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 NAT8Q9UHE5 227 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 TENM2Q9NT68 2774 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.02□□□□□ -2.09
SMC6-208ENST00000481708 A0A0J9YW62 118 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 ARRDC5A6NEK1 342 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 CORTO00230 105 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 HRASP01112 189 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 KRASP01116 189 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 RBM11P57052 281 aaKnown RBP2.02□□□□□ -2.09
SMC6-208ENST00000481708 LYRM7Q5U5X0 104 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 AMTNQ6UX39 209 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 C2orf91Q6ZV80 131 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 RNF175Q8N4F7 328 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 Q8N6K4 173 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 TUBA4BQ9H853 241 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 IGKV1D-42A0A075B6H8 117 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 ZNF670-ZNF695F2Z2N8 137 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 CSN1S1P47710 185 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 TMBIM6P55061 237 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 PATE2Q6UY27 113 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 LYPD6Q86Y78 171 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 TCTE3Q8IZS6 198 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 CNEP1R1Q8N9A8 125 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 OR8A1Q8NGG7 326 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 SPANXA1Q9NS26 97 aa2.02□□□□□ -2.09
SMC6-208ENST00000481708 GGT3PA6NGU5 568 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 NPFFO15130 113 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 TAS2R45P59539 299 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 NCS1P62166 190 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 DEFB110Q30KQ9 67 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 VMA21Q3ZAQ7 101 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 GFI1BQ5VTD9 330 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 SDIM1Q6ZPB5 146 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 ZNF767PQ75MW2 155 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 NDUFA11Q86Y39 141 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 MUC7Q8TAX7 377 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 ARL11Q969Q4 196 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 TRBV7-6A0A0J9YX20 115 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 OR51F1A6NGY5 319 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 M0R2Z0 102 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 MSMBP08118 114 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 SMIM6P0DI80 62 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 RBP2P50120 134 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 HOXC5Q00444 222 aa2.01□□□□□ -2.09
SMC6-208ENST00000481708 MEF2BQ02080 365 aaPredicted RBP2.01□□□□□ -2.09
SMC6-208ENST00000481708 SOSTDC1Q6X4U4 206 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms