RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 C11orf21Q9P2W6 132 aa8.82□□□□□ -1
VCL-205ENST00000478896 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
VCL-205ENST00000478896 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
VCL-205ENST00000478896 GAGE12JA6NER3 117 aa8.81□□□□□ -1
VCL-205ENST00000478896 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
VCL-205ENST00000478896 DEFA1P59665 94 aa8.81□□□□□ -1
VCL-205ENST00000478896 DEFA3P59666 94 aa8.81□□□□□ -1
VCL-205ENST00000478896 FLI1Q01543 452 aaPredicted RBP8.81□□□□□ -1
VCL-205ENST00000478896 GAGE1Q13065 139 aa8.81□□□□□ -1
VCL-205ENST00000478896 GAGE4Q13068 117 aa8.81□□□□□ -1
VCL-205ENST00000478896 GAGE5Q13069 117 aa8.81□□□□□ -1
VCL-205ENST00000478896 GAGE13Q4V321 117 aa8.81□□□□□ -1
VCL-205ENST00000478896 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
VCL-205ENST00000478896 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
VCL-205ENST00000478896 LECT2O14960 151 aa8.8□□□□□ -1
VCL-205ENST00000478896 C1QBP02746 253 aa8.8□□□□□ -1
VCL-205ENST00000478896 RNASE3P12724 160 aaKnown RBP8.8□□□□□ -1
VCL-205ENST00000478896 GCHFRP30047 84 aa8.8□□□□□ -1
VCL-205ENST00000478896 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
VCL-205ENST00000478896 WFDC2Q14508 124 aa8.8□□□□□ -1
VCL-205ENST00000478896 LGALSLQ3ZCW2 172 aaPredicted RBP8.8□□□□□ -1
VCL-205ENST00000478896 TOR2AQ5JU69 321 aa8.8□□□□□ -1
VCL-205ENST00000478896 Q8N3U1 123 aa8.8□□□□□ -1
VCL-205ENST00000478896 CYB561D1Q8N8Q1 229 aa8.8□□□□□ -1
VCL-205ENST00000478896 RAB24Q969Q5 203 aa8.8□□□□□ -1
VCL-205ENST00000478896 PARLQ9H300 379 aa8.8□□□□□ -1
VCL-205ENST00000478896 A8MWV9 139 aa8.79□□□□□ -1
VCL-205ENST00000478896 GGTLC3B5MD39 225 aa8.79□□□□□ -1
VCL-205ENST00000478896 SAPCD1Q5SSQ6 148 aa8.79□□□□□ -1
VCL-205ENST00000478896 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
VCL-205ENST00000478896 OR2G3Q8NGZ4 309 aa8.79□□□□□ -1
VCL-205ENST00000478896 PTH2Q96A98 100 aa8.79□□□□□ -1
VCL-205ENST00000478896 TMEM167BQ9NRX6 74 aa8.79□□□□□ -1
VCL-205ENST00000478896 EPDR1Q9UM22 224 aa8.79□□□□□ -1
VCL-205ENST00000478896 URGCP-MRPS24S4R325 110 aa8.79□□□□□ -1
VCL-205ENST00000478896 CXorf1O96002 111 aa8.78□□□□□ -1
VCL-205ENST00000478896 IGLV2-11P01706 119 aa8.78□□□□□ -1
VCL-205ENST00000478896 MBP02144 154 aa8.78□□□□□ -1
VCL-205ENST00000478896 ASIPP42127 132 aa8.78□□□□□ -1
VCL-205ENST00000478896 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
VCL-205ENST00000478896 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
VCL-205ENST00000478896 OR2T35Q8NGX2 323 aa8.78□□□□□ -1
VCL-205ENST00000478896 PSMG3Q9BT73 122 aaPredicted RBP8.78□□□□□ -1
VCL-205ENST00000478896 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
VCL-205ENST00000478896 ATP6V0CP27449 155 aa8.77□□□□□ -1.01
VCL-205ENST00000478896 FGF8P55075 233 aaPredicted RBP8.77□□□□□ -1.01
VCL-205ENST00000478896 SUN5Q8TC36 379 aa8.77□□□□□ -1.01
VCL-205ENST00000478896 RMI2Q96E14 147 aa8.77□□□□□ -1.01
VCL-205ENST00000478896 MYCBP2O75592 4640 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 A0A087WWC5 75 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 TRAV34A0A0B4J273 112 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 IGKV3D-20A0A0C4DH25 116 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 LINC00694P0DN24 101 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 FAM74A4Q5TZK3 123 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 Q6ZSA8 131 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
VCL-205ENST00000478896 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 ARL2-SNX15V9GYD0 113 aa8.76□□□□□ -1.01
VCL-205ENST00000478896 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 RBFOX3A6NFN3 312 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 FABP5P3A8MUU1 101 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 H3BVH4 76 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 IFNA7P01567 189 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 SEC11BP0C7V7 166 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 SERF2P84101 59 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 PIK3CD-AS1Q5SR53 167 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 C14orf178Q8N769 122 aaPredicted RBP8.75□□□□□ -1.01
VCL-205ENST00000478896 SYT8Q8NBV8 401 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 DEFB104AQ8WTQ1 72 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 SAMD10Q9BYL1 202 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 JPT2Q9H910 190 aa8.75□□□□□ -1.01
VCL-205ENST00000478896 A0A1W2PRE2 83 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 B4DEV8 164 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 RHODO00212 210 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 UBE2G2P60604 165 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 KCNIP4Q6PIL6 250 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 AQP10Q96PS8 301 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 IL36BQ9NZH7 164 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 TNFSF18Q9UNG2 199 aa8.74□□□□□ -1.01
VCL-205ENST00000478896 M0R036 132 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 DMRTA1Q5VZB9 504 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 Q86TA4 180 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 Q8N976 141 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 OR11H4Q8NGC9 324 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 Q9UF83 564 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 ALG5Q9Y673 324 aa8.73□□□□□ -1.01
VCL-205ENST00000478896 A0A087WX48 190 aa8.72□□□□□ -1.01
VCL-205ENST00000478896 PEX7O00628 323 aa8.72□□□□□ -1.01
VCL-205ENST00000478896 UFSP1Q6NVU6 142 aa8.72□□□□□ -1.01
VCL-205ENST00000478896 NIT1Q86X76 327 aa8.72□□□□□ -1.01
VCL-205ENST00000478896 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
VCL-205ENST00000478896 PHLDA3Q9Y5J5 127 aa8.72□□□□□ -1.01
VCL-205ENST00000478896 A0A087WWL8 130 aa8.71□□□□□ -1.02
VCL-205ENST00000478896 CTXND1A0A1B0GTU2 59 aa8.71□□□□□ -1.02
VCL-205ENST00000478896 GRIFINA4D1Z8 144 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms