RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RBAKDNA6NC62 111 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 PGPA6NDG6 321 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 CCSO14618 274 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 CAMLGP49069 296 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 CAV2P51636 162 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 FGF8P55075 233 aaPredicted RBP4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 PRR4Q16378 134 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 MIC13Q5XKP0 118 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 Q6ZNX1 250 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 CLVS1Q8IUQ0 354 aaPredicted RBP4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 C12orf45Q8N5I9 185 aaPredicted RBP4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 OR1L4Q8NGR5 311 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 PTH2Q96A98 100 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 PFDN5Q99471 154 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 GGACTQ9BVM4 153 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 C20orf85Q9H1P6 137 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 SLC39A9Q9NUM3 307 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 LENEPQ9Y5L5 61 aa4.5□□□□□ -1.69
SPTLC1-205ENST00000477888 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 MIAQ16674 131 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 TMEM128Q5BJH2 165 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 KCNIP4Q6PIL6 250 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 ZFP2Q6ZN57 461 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 C15orf54Q8N8G6 183 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 OR2T35Q8NGX2 323 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 LYPD6BQ8NI32 183 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 ATP5SQ99766 215 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 GPN1Q9HCN4 374 aaPredicted RBP4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 SCP2D1Q9UJQ7 156 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 RAB26Q9ULW5 256 aa4.49□□□□□ -1.69
SPTLC1-205ENST00000477888 TRAV21A0A0B4J279 112 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 TMEM262E9PQX1 116 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 RHODO00212 210 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 SSSCA1O60232 199 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 CRPP02741 224 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 TCRBP04435 133 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 NBEAP1P0C6P0 100 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 MRPS10P82664 201 aaKnown RBP4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 COX6A2Q02221 97 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 MAJINQ3KP22 176 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 Q6ZRP5 223 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 NRARPQ7Z6K4 114 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 C14orf178Q8N769 122 aaPredicted RBP4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 TMEM75Q8N9X5 138 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 SMIM4Q8WVI0 70 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 TMED6Q8WW62 240 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 KCNS1Q96KK3 526 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 FAM167A-AS1Q96KT0 104 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 C9orf85Q96MD7 179 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 PARLQ9H300 379 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 SDF2L1Q9HCN8 221 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 PRR34Q9NV39 138 aa4.48□□□□□ -1.69
SPTLC1-205ENST00000477888 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 TRAV26-2A0A0B4J265 109 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 hDV102S1A0JD36 115 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 ANKRD20A5PA0PJZ0 165 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 TSC22D2O75157 780 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 ANGP03950 147 aaKnown RBP4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 SMIM18P0DKX4 95 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 RPL29P47914 159 aaKnown RBP4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 TAS2R30P59541 319 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 NCS1P62166 190 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 SNRPEP62304 92 aaKnown RBP4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 MPV17L2Q567V2 206 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 STPG4Q8N801 248 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 OR10G7Q8NGN6 311 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 DYNC2LI1Q8TCX1 351 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 ASB13Q8WXK3 278 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 TVP23CQ96ET8 276 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 SLC25A2Q9BXI2 301 aa4.47□□□□□ -1.69
SPTLC1-205ENST00000477888 SFT2D2O95562 160 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 CSN1S1P47710 185 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 GCSAMLQ5JQS6 135 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 OR2G3Q8NGZ4 309 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 FXYD5Q96DB9 178 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 PHYHIPLQ96FC7 376 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 MCUBQ9NWR8 336 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 C11orf21Q9P2W6 132 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 WDR83OSQ9Y284 106 aa4.46□□□□□ -1.7
SPTLC1-205ENST00000477888 TRBV6-8A0A0A6YYG3 113 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 FAM24AA6NFZ4 105 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 A8MWV9 139 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 NDUFS6O75380 124 aaKnown RBP4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 VBP1P61758 197 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 RANP62826 216 aaKnown RBP4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 CACNG7P62955 275 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 PPP1R1AQ13522 171 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 PIK3CD-AS1Q5SR53 167 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 MIXL1Q9H2W2 232 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 VCX3BQ9H321 246 aa4.45□□□□□ -1.7
SPTLC1-205ENST00000477888 JPT2Q9H910 190 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms