RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 MRPL16Q9NX20 251 aaKnown RBP7.31□□□□□ -1.24
CASC3-204ENST00000474190 MUC4Q99102 2169 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 CXorf65A6NEN9 183 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 H3BVH4 76 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 SPART-AS1P0CW21 52 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 MED14OSP0DP75 135 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 HOXA5P20719 270 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 ASIPP42127 132 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 FOXA3P55318 350 aaPredicted RBP7.3□□□□□ -1.24
CASC3-204ENST00000474190 ZNF415Q09FC8 603 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 LGALS9BQ3B8N2 356 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 OR10AG1Q8NH19 301 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 C11orf45Q8TAV5 145 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 SEC11CQ9BY50 192 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 RPP21Q9H633 154 aaKnown RBP7.3□□□□□ -1.24
CASC3-204ENST00000474190 JPT2Q9H910 190 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 CARHSP1Q9Y2V2 147 aaKnown RBP7.3□□□□□ -1.24
CASC3-204ENST00000474190 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
CASC3-204ENST00000474190 GAGE12BA1L429 117 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 M0R2P5 195 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 GAGE7O76087 117 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 P01737 135 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 OR5AL1P0C617 328 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 GAGE12FP0CL80 117 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 GAGE12GP0CL81 117 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 GAGE12IP0CL82 117 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 DEFB130BP0DP73 79 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 DEFB130AP0DP74 79 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 ADIRFQ15847 76 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 CT83Q5H943 113 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 SFRP2Q96HF1 295 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 SPXQ9BT56 116 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
CASC3-204ENST00000474190 KMT2AQ03164 3969 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 IGHV4-4A0A075B6R2 117 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 MUC21A0A0G2JKD1 596 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 MUC21A0A140T8X8 626 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 SNURFLB1AK76 121 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 CTRLP40313 264 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 LINC00315P59091 139 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 Q6ZSN1 163 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 ZNF479Q96JC4 524 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 SAMD10Q9BYL1 202 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 BIN3Q9NQY0 253 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 MSRB1Q9NZV6 116 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 KIF25-AS1Q9Y6Z4 181 aa7.28□□□□□ -1.24
CASC3-204ENST00000474190 TEX48A0A1B0GUV7 120 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 RS1O15537 224 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 GATCO43716 136 aaKnown RBP7.27□□□□□ -1.25
CASC3-204ENST00000474190 CRYGDP07320 174 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 ERVFC1-1P60608 527 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 FHL2Q14192 279 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 PIK3CD-AS1Q5SR53 167 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 CFAP126Q5VTH2 177 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 LYZL1Q6UWQ5 148 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 MUC7Q8TAX7 377 aa7.27□□□□□ -1.25
CASC3-204ENST00000474190 PHLDA1Q8WV24 401 aaPredicted RBP7.27□□□□□ -1.25
CASC3-204ENST00000474190 SMIM27A0A1W2PRY6 76 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 F8W036 122 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 RPS20P60866 119 aaKnown RBP7.26□□□□□ -1.25
CASC3-204ENST00000474190 DAD1P61803 113 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 RNF212Q495C1 297 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 ZNF876PQ49A33 203 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 OR10G8Q8NGN5 311 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 TSKUQ8WUA8 353 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 DAZAP1Q96EP5 407 aaKnown RBP7.26□□□□□ -1.25
CASC3-204ENST00000474190 VSIG2Q96IQ7 327 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 Q9UF83 564 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 HERC2O95714 4834 aa7.26□□□□□ -1.25
CASC3-204ENST00000474190 S100A4P26447 101 aaKnown RBP7.25□□□□□ -1.25
CASC3-204ENST00000474190 PNRC1Q12796 327 aaPredicted RBP7.25□□□□□ -1.25
CASC3-204ENST00000474190 CEMP1Q6PRD7 247 aaPredicted RBP7.25□□□□□ -1.25
CASC3-204ENST00000474190 NDUFAF3Q9BU61 184 aa7.25□□□□□ -1.25
CASC3-204ENST00000474190 GFRA4Q9GZZ7 299 aa7.25□□□□□ -1.25
CASC3-204ENST00000474190 DEFB131BA0A096LNP1 70 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 TRAV4A0A0B4J268 109 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 A0A1W2PPQ1 181 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 FAM231BA6NCW3 169 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 HIGD1CA8MV81 97 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 A8MWL6 223 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 IGHV3-53P01767 116 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 ZFAND6Q6FIF0 208 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 ATRAIDQ6UW56 229 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
CASC3-204ENST00000474190 TRAV10A0A0B4J240 114 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 M0R381 172 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 ATP5G1P05496 136 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 GATA1P15976 413 aaPredicted RBP7.23□□□□□ -1.25
CASC3-204ENST00000474190 NTF3P20783 257 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 ZFP82Q8N141 532 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 CLRN3Q8NCR9 226 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 APLNQ9ULZ1 77 aa7.23□□□□□ -1.25
CASC3-204ENST00000474190 PHLDA3Q9Y5J5 127 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms