RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TM2D2Q9BX73 214 aa15.19■□□□□ 0.02
USP42-205ENST00000465073 PGPEP1LA6NFU8 196 aa15.18■□□□□ 0.02
USP42-205ENST00000465073 IGLV2-11P01706 119 aa15.18■□□□□ 0.02
USP42-205ENST00000465073 GCHFRP30047 84 aa15.18■□□□□ 0.02
USP42-205ENST00000465073 ZFP69Q49AA0 526 aa15.18■□□□□ 0.02
USP42-205ENST00000465073 SH3BGRL3Q9H299 93 aa15.18■□□□□ 0.02
USP42-205ENST00000465073 C1QBP02746 253 aa15.17■□□□□ 0.02
USP42-205ENST00000465073 FLI1Q01543 452 aaPredicted RBP15.17■□□□□ 0.02
USP42-205ENST00000465073 EPDR1Q9UM22 224 aa15.17■□□□□ 0.02
USP42-205ENST00000465073 RNASE3P12724 160 aaKnown RBP15.16■□□□□ 0.02
USP42-205ENST00000465073 SUMO1P63165 101 aaKnown RBP15.16■□□□□ 0.02
USP42-205ENST00000465073 SAPCD1Q5SSQ6 148 aa15.16■□□□□ 0.02
USP42-205ENST00000465073 TMEM75Q8N9X5 138 aa15.16■□□□□ 0.02
USP42-205ENST00000465073 HSD17B11Q8NBQ5 300 aa15.16■□□□□ 0.02
USP42-205ENST00000465073 PSMG3Q9BT73 122 aaPredicted RBP15.16■□□□□ 0.02
USP42-205ENST00000465073 MYCBP2O75592 4640 aa15.16■□□□□ 0.02
USP42-205ENST00000465073 MBP02144 154 aa15.15■□□□□ 0.02
USP42-205ENST00000465073 PRNTQ86SH4 94 aa15.15■□□□□ 0.02
USP42-205ENST00000465073 CYB561D1Q8N8Q1 229 aa15.15■□□□□ 0.02
USP42-205ENST00000465073 TMEM167BQ9NRX6 74 aa15.15■□□□□ 0.02
USP42-205ENST00000465073 SERF2P84101 59 aa15.14■□□□□ 0.01
USP42-205ENST00000465073 PIK3CD-AS1Q5SR53 167 aa15.14■□□□□ 0.01
USP42-205ENST00000465073 ZFP2Q6ZN57 461 aa15.14■□□□□ 0.01
USP42-205ENST00000465073 FAM30AQ9NZY2 134 aa15.14■□□□□ 0.01
USP42-205ENST00000465073 GGTLC3B5MD39 225 aa15.14■□□□□ 0.01
USP42-205ENST00000465073 CXorf1O96002 111 aa15.14■□□□□ 0.01
USP42-205ENST00000465073 A8MWV9 139 aa15.13■□□□□ 0.01
USP42-205ENST00000465073 PARLQ9H300 379 aa15.13■□□□□ 0.01
USP42-205ENST00000465073 TRAV8-3A0A0A6YYJ7 113 aa15.12■□□□□ 0.01
USP42-205ENST00000465073 A6NHS1 94 aa15.12■□□□□ 0.01
USP42-205ENST00000465073 ATP6V0CP27449 155 aa15.12■□□□□ 0.01
USP42-205ENST00000465073 AQP10Q96PS8 301 aa15.12■□□□□ 0.01
USP42-205ENST00000465073 S100A4P26447 101 aaKnown RBP15.11■□□□□ 0.01
USP42-205ENST00000465073 ACTR3CQ9C0K3 210 aaPredicted RBP15.11■□□□□ 0.01
USP42-205ENST00000465073 GAGE12JA6NER3 117 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 LINC00694P0DN24 101 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 GAGE1Q13065 139 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 GAGE4Q13068 117 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 GAGE5Q13069 117 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 LGALSLQ3ZCW2 172 aaPredicted RBP15.1■□□□□ 0.01
USP42-205ENST00000465073 GAGE13Q4V321 117 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 TOR2AQ5JU69 321 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 TNFSF18Q9UNG2 199 aa15.1■□□□□ 0.01
USP42-205ENST00000465073 A0A087WWC5 75 aa15.09■□□□□ 0.01
USP42-205ENST00000465073 IGKV3D-20A0A0C4DH25 116 aa15.09■□□□□ 0.01
USP42-205ENST00000465073 A0A1W2PRE2 83 aa15.09■□□□□ 0.01
USP42-205ENST00000465073 WFDC2Q14508 124 aa15.09■□□□□ 0.01
USP42-205ENST00000465073 Q8N3U1 123 aa15.09■□□□□ 0.01
USP42-205ENST00000465073 FABP5P3A8MUU1 101 aa15.08■□□□□ 0.01
USP42-205ENST00000465073 ASIPP42127 132 aa15.08■□□□□ 0.01
USP42-205ENST00000465073 FGF8P55075 233 aaPredicted RBP15.08■□□□□ 0.01
USP42-205ENST00000465073 ALG5Q9Y673 324 aa15.08■□□□□ 0.01
USP42-205ENST00000465073 Q6ZSA8 131 aa15.08■□□□□ 0
USP42-205ENST00000465073 OR2T35Q8NGX2 323 aa15.08■□□□□ 0
USP42-205ENST00000465073 LINC00479Q96M42 142 aa15.08■□□□□ 0
USP42-205ENST00000465073 TRAV34A0A0B4J273 112 aa15.07■□□□□ 0
USP42-205ENST00000465073 UFSP1Q6NVU6 142 aa15.07■□□□□ 0
USP42-205ENST00000465073 DAZ4Q86SG3 579 aaKnown RBP15.07■□□□□ 0
USP42-205ENST00000465073 DAZ3Q9NR90 486 aaKnown RBP15.07■□□□□ 0
USP42-205ENST00000465073 IL36BQ9NZH7 164 aa15.07■□□□□ 0
USP42-205ENST00000465073 COX11Q9Y6N1 276 aa15.07■□□□□ 0
USP42-205ENST00000465073 ARL2-SNX15V9GYD0 113 aa15.07■□□□□ 0
USP42-205ENST00000465073 PLA2G1BP04054 148 aaKnown RBP15.06■□□□□ 0
USP42-205ENST00000465073 J3QL48 77 aa15.05■□□□□ -0
USP42-205ENST00000465073 LECT2O14960 151 aa15.05■□□□□ -0
USP42-205ENST00000465073 IFNA7P01567 189 aa15.05■□□□□ -0
USP42-205ENST00000465073 JPT2Q9H910 190 aa15.05■□□□□ -0
USP42-205ENST00000465073 Q9UF83 564 aa15.05■□□□□ -0
USP42-205ENST00000465073 SAMD10Q9BYL1 202 aa15.04■□□□□ -0
USP42-205ENST00000465073 B4DEV8 164 aa15.03■□□□□ -0
USP42-205ENST00000465073 RHODO00212 210 aa15.03■□□□□ -0
USP42-205ENST00000465073 DMRTA1Q5VZB9 504 aa15.03■□□□□ -0
USP42-205ENST00000465073 C14orf178Q8N769 122 aaPredicted RBP15.03■□□□□ -0
USP42-205ENST00000465073 SYT8Q8NBV8 401 aa15.03■□□□□ -0
USP42-205ENST00000465073 MED28Q9H204 178 aa15.03■□□□□ -0
USP42-205ENST00000465073 SEC11BP0C7V7 166 aa15.02■□□□□ -0
USP42-205ENST00000465073 DNLZQ5SXM8 178 aa15.02■□□□□ -0
USP42-205ENST00000465073 RMI2Q96E14 147 aa15.02■□□□□ -0
USP42-205ENST00000465073 NKX6-2Q9C056 277 aaPredicted RBP15.02■□□□□ -0
USP42-205ENST00000465073 URGCP-MRPS24S4R325 110 aa15.02■□□□□ -0
USP42-205ENST00000465073 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.01□□□□□ -0.01
USP42-205ENST00000465073 PEX7O00628 323 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 Q86TA4 180 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 INO80EQ8NBZ0 244 aaPredicted RBP15.01□□□□□ -0.01
USP42-205ENST00000465073 BAALCQ8WXS3 180 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 HIST1H2BAQ96A08 127 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 BORCS7-ASMTA0A0B4J1R7 106 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 CTXND1A0A1B0GTU2 59 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 KRBOX1C9JBD0 128 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 H3BVH4 76 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 UBE2G2P60604 165 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 ZNF726P1Q15940 193 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 LINC00528Q8N1L1 170 aa15.01□□□□□ -0.01
USP42-205ENST00000465073 ARMS2P0C7Q2 107 aa15□□□□□ -0.01
USP42-205ENST00000465073 Q5BKY6 102 aa15□□□□□ -0.01
USP42-205ENST00000465073 RPL7L1Q6DKI1 246 aaKnown RBP15□□□□□ -0.01
USP42-205ENST00000465073 NIT1Q86X76 327 aa15□□□□□ -0.01
USP42-205ENST00000465073 Q8N976 141 aa15□□□□□ -0.01
USP42-205ENST00000465073 OR11H4Q8NGC9 324 aa15□□□□□ -0.01
USP42-205ENST00000465073 ZFP30Q9Y2G7 519 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms